Protein–RNA interactions for Protein: Q3V009

Tmed1, Transmembrane emp24 domain-containing protein 1, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed1Q3V009 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmed1Q3V009 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tmed1Q3V009 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tmed1Q3V009 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmed1Q3V009 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.12■□□□□ 0.49
Tmed1Q3V009 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmed1Q3V009 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Tmed1Q3V009 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmed1Q3V009 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmed1Q3V009 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Tmed1Q3V009 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmed1Q3V009 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmed1Q3V009 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmed1Q3V009 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmed1Q3V009 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmed1Q3V009 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmed1Q3V009 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmed1Q3V009 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmed1Q3V009 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmed1Q3V009 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Tmed1Q3V009 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmed1Q3V009 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.1■□□□□ 0.49
Tmed1Q3V009 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmed1Q3V009 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmed1Q3V009 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tmed1Q3V009 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmed1Q3V009 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.1■□□□□ 0.49
Tmed1Q3V009 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.1■□□□□ 0.49
Tmed1Q3V009 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.1■□□□□ 0.49
Tmed1Q3V009 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmed1Q3V009 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Tmed1Q3V009 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmed1Q3V009 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmed1Q3V009 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmed1Q3V009 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tmed1Q3V009 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Gm9847-201ENSMUST00000052528 599 ntBASIC18.09■□□□□ 0.49
Tmed1Q3V009 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.09■□□□□ 0.49
Tmed1Q3V009 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmed1Q3V009 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.09■□□□□ 0.49
Tmed1Q3V009 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tmed1Q3V009 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tmed1Q3V009 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Tmed1Q3V009 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tmed1Q3V009 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmed1Q3V009 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmed1Q3V009 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmed1Q3V009 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmed1Q3V009 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Tmed1Q3V009 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmed1Q3V009 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.07■□□□□ 0.48
Tmed1Q3V009 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.07■□□□□ 0.48
Tmed1Q3V009 BC021767-201ENSMUST00000126387 1716 ntBASIC18.07■□□□□ 0.48
Tmed1Q3V009 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Spcs1-204ENSMUST00000226782 949 ntBASIC18.07■□□□□ 0.48
Tmed1Q3V009 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.07■□□□□ 0.48
Tmed1Q3V009 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tmed1Q3V009 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tmed1Q3V009 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tmed1Q3V009 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.06■□□□□ 0.48
Tmed1Q3V009 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Tmed1Q3V009 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Tmed1Q3V009 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tmed1Q3V009 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tmed1Q3V009 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.06■□□□□ 0.48
Tmed1Q3V009 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.06■□□□□ 0.48
Tmed1Q3V009 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.06■□□□□ 0.48
Tmed1Q3V009 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tmed1Q3V009 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms