Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc6aQ3UHK8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc6aQ3UHK8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc6aQ3UHK8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc6aQ3UHK8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 Gm43799-201ENSMUST00000201845 579 ntBASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnrc6aQ3UHK8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnrc6aQ3UHK8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Zfp783-201ENSMUST00000095946 670 ntBASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnrc6aQ3UHK8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnrc6aQ3UHK8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnrc6aQ3UHK8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnrc6aQ3UHK8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnrc6aQ3UHK8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnrc6aQ3UHK8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnrc6aQ3UHK8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnrc6aQ3UHK8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnrc6aQ3UHK8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnrc6aQ3UHK8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnrc6aQ3UHK8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnrc6aQ3UHK8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tnrc6aQ3UHK8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Tnrc6aQ3UHK8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms