Protein–RNA interactions for Protein: P70343

Casp4, Caspase-4, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp4P70343 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Casp4P70343 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.31■□□□□ 0.68
Casp4P70343 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casp4P70343 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Casp4P70343 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casp4P70343 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casp4P70343 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casp4P70343 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Casp4P70343 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casp4P70343 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Casp4P70343 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casp4P70343 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casp4P70343 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casp4P70343 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casp4P70343 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Casp4P70343 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.3■□□□□ 0.68
Casp4P70343 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.3■□□□□ 0.68
Casp4P70343 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casp4P70343 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Casp4P70343 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casp4P70343 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casp4P70343 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casp4P70343 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.29■□□□□ 0.68
Casp4P70343 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.29■□□□□ 0.68
Casp4P70343 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.29■□□□□ 0.68
Casp4P70343 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.29■□□□□ 0.68
Casp4P70343 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.29■□□□□ 0.68
Casp4P70343 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Casp4P70343 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.29■□□□□ 0.68
Casp4P70343 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.29■□□□□ 0.68
Casp4P70343 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Casp4P70343 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Casp4P70343 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Casp4P70343 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Casp4P70343 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Casp4P70343 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casp4P70343 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.28■□□□□ 0.68
Casp4P70343 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.28■□□□□ 0.68
Casp4P70343 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casp4P70343 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casp4P70343 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casp4P70343 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casp4P70343 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Casp4P70343 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casp4P70343 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Casp4P70343 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp4P70343 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp4P70343 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Casp4P70343 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Casp4P70343 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp4P70343 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp4P70343 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Casp4P70343 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Casp4P70343 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Casp4P70343 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Casp4P70343 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp4P70343 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp4P70343 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Casp4P70343 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Casp4P70343 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Casp4P70343 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp4P70343 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Casp4P70343 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.26■□□□□ 0.67
Casp4P70343 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.26■□□□□ 0.67
Casp4P70343 Gm29257-201ENSMUST00000186115 639 ntBASIC19.26■□□□□ 0.67
Casp4P70343 Gm37179-201ENSMUST00000194862 823 ntBASIC19.26■□□□□ 0.67
Casp4P70343 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.26■□□□□ 0.67
Casp4P70343 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp4P70343 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Casp4P70343 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp4P70343 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp4P70343 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Casp4P70343 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Casp4P70343 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Casp4P70343 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Casp4P70343 Gm7860-201ENSMUST00000121190 879 ntBASIC19.25■□□□□ 0.67
Casp4P70343 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.25■□□□□ 0.67
Casp4P70343 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.25■□□□□ 0.67
Casp4P70343 Gm7514-201ENSMUST00000209475 934 ntBASIC19.25■□□□□ 0.67
Casp4P70343 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Casp4P70343 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Casp4P70343 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Casp4P70343 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Casp4P70343 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms