Protein–RNA interactions for Protein: P59438

Hps5, Hermansky-Pudlak syndrome 5 protein homolog, mousemouse

Predictions only

Length 1,126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps5P59438 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.69■□□□□ 0.9
Hps5P59438 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hps5P59438 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hps5P59438 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Hps5P59438 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps5P59438 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps5P59438 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps5P59438 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Hps5P59438 Rab3c-203ENSMUST00000224180 967 ntBASIC20.68■□□□□ 0.9
Hps5P59438 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps5P59438 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps5P59438 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hps5P59438 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps5P59438 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hps5P59438 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Hps5P59438 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps5P59438 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Hps5P59438 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hps5P59438 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.68■□□□□ 0.9
Hps5P59438 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hps5P59438 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hps5P59438 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hps5P59438 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.67■□□□□ 0.9
Hps5P59438 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hps5P59438 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.67■□□□□ 0.9
Hps5P59438 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.67■□□□□ 0.9
Hps5P59438 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hps5P59438 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hps5P59438 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hps5P59438 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hps5P59438 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hps5P59438 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Hps5P59438 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hps5P59438 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hps5P59438 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.66■□□□□ 0.9
Hps5P59438 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hps5P59438 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hps5P59438 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hps5P59438 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hps5P59438 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.66■□□□□ 0.9
Hps5P59438 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hps5P59438 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.66■□□□□ 0.9
Hps5P59438 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hps5P59438 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Hps5P59438 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hps5P59438 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hps5P59438 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hps5P59438 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps5P59438 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps5P59438 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps5P59438 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Hps5P59438 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.65■□□□□ 0.9
Hps5P59438 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps5P59438 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps5P59438 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Hps5P59438 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hps5P59438 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.65■□□□□ 0.9
Hps5P59438 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.65■□□□□ 0.9
Hps5P59438 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps5P59438 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hps5P59438 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hps5P59438 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hps5P59438 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Hps5P59438 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hps5P59438 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hps5P59438 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hps5P59438 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hps5P59438 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hps5P59438 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hps5P59438 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hps5P59438 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hps5P59438 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hps5P59438 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Hps5P59438 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps5P59438 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps5P59438 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps5P59438 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps5P59438 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hps5P59438 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hps5P59438 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps5P59438 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.63■□□□□ 0.89
Hps5P59438 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps5P59438 Gm38205-201ENSMUST00000192243 258 ntBASIC20.63■□□□□ 0.89
Hps5P59438 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps5P59438 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Hps5P59438 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.63■□□□□ 0.89
Hps5P59438 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps5P59438 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hps5P59438 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.62■□□□□ 0.89
Hps5P59438 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps5P59438 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps5P59438 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hps5P59438 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps5P59438 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps5P59438 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps5P59438 Gm12896-201ENSMUST00000118430 226 ntBASIC20.62■□□□□ 0.89
Hps5P59438 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps5P59438 Gm9987-201ENSMUST00000069768 567 ntBASIC20.62■□□□□ 0.89
Hps5P59438 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps5P59438 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms