Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.2■□□□□ 0.02
Hes1P35428 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.2■□□□□ 0.02
Hes1P35428 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
Hes1P35428 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hes1P35428 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.2■□□□□ 0.02
Hes1P35428 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Hes1P35428 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Hes1P35428 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hes1P35428 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hes1P35428 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hes1P35428 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hes1P35428 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hes1P35428 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hes1P35428 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Hes1P35428 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hes1P35428 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hes1P35428 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hes1P35428 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hes1P35428 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.19■□□□□ 0.02
Hes1P35428 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hes1P35428 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hes1P35428 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Hes1P35428 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hes1P35428 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hes1P35428 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hes1P35428 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Hes1P35428 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hes1P35428 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hes1P35428 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hes1P35428 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hes1P35428 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hes1P35428 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hes1P35428 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hes1P35428 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hes1P35428 Gm13234-201ENSMUST00000120010 747 ntBASIC15.18■□□□□ 0.02
Hes1P35428 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.18■□□□□ 0.02
Hes1P35428 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Hes1P35428 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hes1P35428 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Hes1P35428 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hes1P35428 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hes1P35428 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.18■□□□□ 0.02
Hes1P35428 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.17■□□□□ 0.02
Hes1P35428 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Golph3-205ENSMUST00000228671 2842 ntBASIC15.17■□□□□ 0.02
Hes1P35428 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Hes1P35428 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.17■□□□□ 0.02
Hes1P35428 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Hes1P35428 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hes1P35428 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.16■□□□□ 0.02
Hes1P35428 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hes1P35428 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hes1P35428 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hes1P35428 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hes1P35428 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Hes1P35428 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hes1P35428 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.16■□□□□ 0.02
Hes1P35428 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.16■□□□□ 0.02
Hes1P35428 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hes1P35428 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hes1P35428 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hes1P35428 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Hes1P35428 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hes1P35428 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hes1P35428 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hes1P35428 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.16■□□□□ 0.02
Hes1P35428 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms