Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC28.04■■■□□ 2.08
COL5A2P05997 FAM197Y4-202ENST00000622692 608 ntBASIC28.04■■■□□ 2.08
COL5A2P05997 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
COL5A2P05997 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
COL5A2P05997 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC28.04■■■□□ 2.08
COL5A2P05997 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
COL5A2P05997 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
COL5A2P05997 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC28.03■■■□□ 2.08
COL5A2P05997 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
COL5A2P05997 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
COL5A2P05997 AC069544.1-201ENST00000609399 999 ntBASIC28.03■■■□□ 2.08
COL5A2P05997 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC28.03■■■□□ 2.08
COL5A2P05997 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
COL5A2P05997 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
COL5A2P05997 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
COL5A2P05997 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL5A2P05997 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL5A2P05997 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC28.02■■■□□ 2.08
COL5A2P05997 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC28.02■■■□□ 2.08
COL5A2P05997 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC28.02■■■□□ 2.08
COL5A2P05997 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC28.02■■■□□ 2.08
COL5A2P05997 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
COL5A2P05997 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL5A2P05997 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
COL5A2P05997 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL5A2P05997 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC28.02■■■□□ 2.08
COL5A2P05997 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL5A2P05997 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC28.02■■■□□ 2.08
COL5A2P05997 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL5A2P05997 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL5A2P05997 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL5A2P05997 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
COL5A2P05997 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
COL5A2P05997 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL5A2P05997 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC28.01■■■□□ 2.07
COL5A2P05997 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
COL5A2P05997 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC28.01■■■□□ 2.07
COL5A2P05997 SLC29A4P2-201ENST00000504749 1089 ntBASIC28.01■■■□□ 2.07
COL5A2P05997 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
COL5A2P05997 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
COL5A2P05997 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
COL5A2P05997 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
COL5A2P05997 ECEL1P3-201ENST00000427961 737 ntBASIC28■■■□□ 2.07
COL5A2P05997 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC28■■■□□ 2.07
COL5A2P05997 Z99916.2-201ENST00000604037 246 ntBASIC28■■■□□ 2.07
COL5A2P05997 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
COL5A2P05997 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC28■■■□□ 2.07
COL5A2P05997 AC139530.1-201ENST00000575312 1977 ntBASIC28■■■□□ 2.07
COL5A2P05997 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28■■■□□ 2.07
COL5A2P05997 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC27.99■■■□□ 2.07
COL5A2P05997 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
COL5A2P05997 GXYLT1P3-201ENST00000453058 1193 ntBASIC27.99■■■□□ 2.07
COL5A2P05997 SNORA78-201ENST00000459373 127 ntBASIC27.99■■■□□ 2.07
COL5A2P05997 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC27.99■■■□□ 2.07
COL5A2P05997 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC27.98■■■□□ 2.07
COL5A2P05997 AC003102.1-202ENST00000563394 1796 ntBASIC27.98■■■□□ 2.07
COL5A2P05997 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
COL5A2P05997 AC092368.3-202ENST00000574180 1591 ntBASIC27.98■■■□□ 2.07
COL5A2P05997 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC27.98■■■□□ 2.07
COL5A2P05997 KLF2-202ENST00000592003 564 ntTSL 3 BASIC27.98■■■□□ 2.07
COL5A2P05997 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
COL5A2P05997 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC27.98■■■□□ 2.07
COL5A2P05997 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
COL5A2P05997 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC27.97■■■□□ 2.07
COL5A2P05997 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
COL5A2P05997 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
COL5A2P05997 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
COL5A2P05997 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC27.97■■■□□ 2.07
COL5A2P05997 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC27.97■■■□□ 2.07
COL5A2P05997 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC27.97■■■□□ 2.07
COL5A2P05997 AL589743.5-201ENST00000616611 1050 ntBASIC27.97■■■□□ 2.07
COL5A2P05997 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
COL5A2P05997 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
COL5A2P05997 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
COL5A2P05997 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC27.96■■■□□ 2.07
COL5A2P05997 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC27.96■■■□□ 2.07
COL5A2P05997 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
COL5A2P05997 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
COL5A2P05997 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
COL5A2P05997 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
COL5A2P05997 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC27.96■■■□□ 2.07
COL5A2P05997 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC27.95■■■□□ 2.07
COL5A2P05997 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
COL5A2P05997 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
COL5A2P05997 RN7SL471P-201ENST00000580476 299 ntBASIC27.95■■■□□ 2.07
COL5A2P05997 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC27.95■■■□□ 2.07
COL5A2P05997 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
COL5A2P05997 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
COL5A2P05997 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.06
COL5A2P05997 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
COL5A2P05997 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC27.95■■■□□ 2.06
COL5A2P05997 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC27.95■■■□□ 2.06
COL5A2P05997 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
COL5A2P05997 MDFI-202ENST00000373050 809 ntTSL 2 BASIC27.95■■■□□ 2.06
COL5A2P05997 MCRIP2P1-201ENST00000394346 511 ntBASIC27.95■■■□□ 2.06
COL5A2P05997 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC27.95■■■□□ 2.06
COL5A2P05997 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC27.95■■■□□ 2.06
COL5A2P05997 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
COL5A2P05997 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC27.95■■■□□ 2.06
COL5A2P05997 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC27.95■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms