Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Krt1P04104 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Krt1P04104 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Krt1P04104 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt1P04104 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt1P04104 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Krt1P04104 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Krt1P04104 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Krt1P04104 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Krt1P04104 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt1P04104 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Krt1P04104 Mir6538-201ENSMUST00000183713 110 ntBASIC17.51■□□□□ 0.39
Krt1P04104 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.51■□□□□ 0.39
Krt1P04104 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt1P04104 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt1P04104 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt1P04104 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt1P04104 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt1P04104 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt1P04104 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt1P04104 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt1P04104 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt1P04104 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Krt1P04104 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Krt1P04104 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Krt1P04104 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.5■□□□□ 0.39
Krt1P04104 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Krt1P04104 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.5■□□□□ 0.39
Krt1P04104 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Krt1P04104 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Krt1P04104 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.5■□□□□ 0.39
Krt1P04104 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt1P04104 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.5■□□□□ 0.39
Krt1P04104 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Krt1P04104 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Krt1P04104 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.49■□□□□ 0.39
Krt1P04104 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Krt1P04104 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt1P04104 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Krt1P04104 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt1P04104 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.49■□□□□ 0.39
Krt1P04104 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt1P04104 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt1P04104 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt1P04104 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt1P04104 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt1P04104 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.49■□□□□ 0.39
Krt1P04104 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.49■□□□□ 0.39
Krt1P04104 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Krt1P04104 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt1P04104 Gm40881-201ENSMUST00000223397 166 ntBASIC17.49■□□□□ 0.39
Krt1P04104 Gm10232-201ENSMUST00000089221 720 ntBASIC17.49■□□□□ 0.39
Krt1P04104 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.49■□□□□ 0.39
Krt1P04104 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt1P04104 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt1P04104 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Krt1P04104 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Krt1P04104 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt1P04104 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt1P04104 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt1P04104 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Krt1P04104 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt1P04104 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt1P04104 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt1P04104 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Krt1P04104 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.48■□□□□ 0.39
Krt1P04104 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt1P04104 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt1P04104 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt1P04104 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Krt1P04104 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt1P04104 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt1P04104 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.47■□□□□ 0.39
Krt1P04104 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt1P04104 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt1P04104 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt1P04104 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Krt1P04104 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Krt1P04104 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt1P04104 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt1P04104 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Krt1P04104 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt1P04104 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.47■□□□□ 0.39
Krt1P04104 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt1P04104 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Krt1P04104 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Krt1P04104 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt1P04104 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Krt1P04104 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt1P04104 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Krt1P04104 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt1P04104 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.46■□□□□ 0.39
Krt1P04104 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Krt1P04104 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.46■□□□□ 0.39
Krt1P04104 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt1P04104 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt1P04104 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt1P04104 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.46■□□□□ 0.39
Krt1P04104 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt1P04104 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms