Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn1O88704 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hcn1O88704 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn1O88704 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcn1O88704 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hcn1O88704 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hcn1O88704 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn1O88704 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.62■□□□□ 0.41
Hcn1O88704 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Hcn1O88704 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn1O88704 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn1O88704 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn1O88704 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.62■□□□□ 0.41
Hcn1O88704 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn1O88704 Gm27405-201ENSMUST00000184201 112 ntBASIC17.62■□□□□ 0.41
Hcn1O88704 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn1O88704 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn1O88704 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.62■□□□□ 0.41
Hcn1O88704 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn1O88704 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hcn1O88704 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Hcn1O88704 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn1O88704 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn1O88704 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcn1O88704 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn1O88704 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Hcn1O88704 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hcn1O88704 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Hcn1O88704 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn1O88704 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn1O88704 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn1O88704 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn1O88704 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn1O88704 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.61■□□□□ 0.41
Hcn1O88704 Gm7291-201ENSMUST00000199147 382 ntBASIC17.61■□□□□ 0.41
Hcn1O88704 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn1O88704 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.61■□□□□ 0.41
Hcn1O88704 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hcn1O88704 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn1O88704 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn1O88704 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn1O88704 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcn1O88704 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn1O88704 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Hcn1O88704 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn1O88704 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn1O88704 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hcn1O88704 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn1O88704 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.6■□□□□ 0.41
Hcn1O88704 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Hcn1O88704 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.6■□□□□ 0.41
Hcn1O88704 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
Hcn1O88704 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn1O88704 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.6■□□□□ 0.41
Hcn1O88704 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn1O88704 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.6■□□□□ 0.41
Hcn1O88704 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn1O88704 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Hcn1O88704 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn1O88704 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn1O88704 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcn1O88704 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hcn1O88704 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 Gm7860-201ENSMUST00000121190 879 ntBASIC17.59■□□□□ 0.41
Hcn1O88704 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Hcn1O88704 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.59■□□□□ 0.41
Hcn1O88704 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.59■□□□□ 0.41
Hcn1O88704 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.59■□□□□ 0.41
Hcn1O88704 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.59■□□□□ 0.41
Hcn1O88704 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.59■□□□□ 0.41
Hcn1O88704 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.59■□□□□ 0.41
Hcn1O88704 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcn1O88704 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hcn1O88704 Gm13146-201ENSMUST00000118508 780 ntBASIC17.58■□□□□ 0.4
Hcn1O88704 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn1O88704 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Hcn1O88704 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn1O88704 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Hcn1O88704 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn1O88704 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn1O88704 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn1O88704 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn1O88704 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.58■□□□□ 0.4
Hcn1O88704 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcn1O88704 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 126.4 ms