Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Spcs1-204ENSMUST00000226782 949 ntBASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trav13d-4A0A0G2JFX3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Gm9847-201ENSMUST00000052528 599 ntBASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav13d-4A0A0G2JFX3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms