Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Vsnl1-202ENSMUST00000220506 1699 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Olfr554-203ENSMUST00000215995 2515 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm24195-201ENSMUST00000116804 137 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm15739-201ENSMUST00000118049 872 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm12944-201ENSMUST00000119262 463 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm14587-201ENSMUST00000121714 658 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm10012-202ENSMUST00000170379 372 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm20530-201ENSMUST00000174261 254 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Pea15b-201ENSMUST00000182806 387 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm27542-201ENSMUST00000184184 256 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm18799-201ENSMUST00000189104 913 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm28926-201ENSMUST00000191063 680 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm37383-201ENSMUST00000191750 745 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm43867-201ENSMUST00000203860 525 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm19039-201ENSMUST00000204363 575 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm3213-201ENSMUST00000219296 441 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 CU024892.1-201ENSMUST00000224869 515 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 AC125087.1-201ENSMUST00000227552 514 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm18637-201ENSMUST00000217665 1900 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm43775-201ENSMUST00000201019 3395 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Gm42595-201ENSMUST00000196771 1607 ntBASIC9.42□□□□□ -0.9
NpcdF8VQB8 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
NpcdF8VQB8 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Dennd2d-204ENSMUST00000183271 2050 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
NpcdF8VQB8 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Napg-201ENSMUST00000025474 3562 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
NpcdF8VQB8 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm29362-201ENSMUST00000187898 133 ntBASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm9517-201ENSMUST00000195021 874 ntBASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm38268-201ENSMUST00000195813 193 ntBASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm43772-201ENSMUST00000202052 379 ntBASIC9.41□□□□□ -0.9
NpcdF8VQB8 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm46231-201ENSMUST00000220152 314 ntBASIC9.41□□□□□ -0.9
NpcdF8VQB8 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC9.41□□□□□ -0.9
NpcdF8VQB8 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC9.41□□□□□ -0.9
NpcdF8VQB8 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
NpcdF8VQB8 4930428N03Rik-204ENSMUST00000224456 3212 ntBASIC9.41□□□□□ -0.9
NpcdF8VQB8 AC122887.1-201ENSMUST00000219265 2722 ntBASIC9.41□□□□□ -0.9
NpcdF8VQB8 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm44835-201ENSMUST00000205544 3181 ntBASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm13081-201ENSMUST00000121527 5599 ntBASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Dnajc28-204ENSMUST00000169982 3535 ntAPPRIS P4 TSL 2 BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Gm37065-203ENSMUST00000192498 1622 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms