Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CSNK1G1Q9HCP0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.17■■□□□ 1.14
CSNK1G1Q9HCP0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.17■■□□□ 1.14
CSNK1G1Q9HCP0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.17■■□□□ 1.14
CSNK1G1Q9HCP0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CSNK1G1Q9HCP0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CSNK1G1Q9HCP0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G1Q9HCP0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G1Q9HCP0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CSNK1G1Q9HCP0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G1Q9HCP0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G1Q9HCP0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.15■■□□□ 1.14
CSNK1G1Q9HCP0 AC026185.1-201ENST00000445748 174 ntBASIC22.15■■□□□ 1.14
CSNK1G1Q9HCP0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.15■■□□□ 1.14
CSNK1G1Q9HCP0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G1Q9HCP0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.15■■□□□ 1.14
CSNK1G1Q9HCP0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G1Q9HCP0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.15■■□□□ 1.14
CSNK1G1Q9HCP0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G1Q9HCP0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G1Q9HCP0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CSNK1G1Q9HCP0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CSNK1G1Q9HCP0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CSNK1G1Q9HCP0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CSNK1G1Q9HCP0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.14■■□□□ 1.13
CSNK1G1Q9HCP0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.14■■□□□ 1.13
CSNK1G1Q9HCP0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CSNK1G1Q9HCP0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CSNK1G1Q9HCP0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.14■■□□□ 1.13
CSNK1G1Q9HCP0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.14■■□□□ 1.13
CSNK1G1Q9HCP0 AC231657.2-201ENST00000624556 255 ntBASIC22.14■■□□□ 1.13
CSNK1G1Q9HCP0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.14■■□□□ 1.13
CSNK1G1Q9HCP0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CSNK1G1Q9HCP0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CSNK1G1Q9HCP0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CSNK1G1Q9HCP0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 CNN2P6-201ENST00000439038 900 ntBASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 TERF1P5-201ENST00000477545 1207 ntBASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CSNK1G1Q9HCP0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.12■■□□□ 1.13
CSNK1G1Q9HCP0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.12■■□□□ 1.13
CSNK1G1Q9HCP0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSNK1G1Q9HCP0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSNK1G1Q9HCP0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSNK1G1Q9HCP0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSNK1G1Q9HCP0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSNK1G1Q9HCP0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.12■■□□□ 1.13
CSNK1G1Q9HCP0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.12■■□□□ 1.13
CSNK1G1Q9HCP0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
CSNK1G1Q9HCP0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSNK1G1Q9HCP0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSNK1G1Q9HCP0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 AC243732.1-201ENST00000612648 864 ntBASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 RBM17P2-201ENST00000616397 1405 ntBASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 AC244015.2-201ENST00000616358 1861 ntBASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.11■■□□□ 1.13
CSNK1G1Q9HCP0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CSNK1G1Q9HCP0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CSNK1G1Q9HCP0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms