Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.12■■□□□ 1.61
NBPF3Q9H094 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NBPF3Q9H094 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
NBPF3Q9H094 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NBPF3Q9H094 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
NBPF3Q9H094 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.12■■□□□ 1.61
NBPF3Q9H094 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NBPF3Q9H094 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NBPF3Q9H094 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.12■■□□□ 1.61
NBPF3Q9H094 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NBPF3Q9H094 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
NBPF3Q9H094 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.12■■□□□ 1.61
NBPF3Q9H094 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NBPF3Q9H094 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
NBPF3Q9H094 AC006970.2-201ENST00000450065 779 ntBASIC25.11■■□□□ 1.61
NBPF3Q9H094 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.11■■□□□ 1.61
NBPF3Q9H094 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.11■■□□□ 1.61
NBPF3Q9H094 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NBPF3Q9H094 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
NBPF3Q9H094 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.11■■□□□ 1.61
NBPF3Q9H094 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NBPF3Q9H094 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NBPF3Q9H094 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC25.11■■□□□ 1.61
NBPF3Q9H094 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.1■■□□□ 1.61
NBPF3Q9H094 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NBPF3Q9H094 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.1■■□□□ 1.61
NBPF3Q9H094 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NBPF3Q9H094 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NBPF3Q9H094 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NBPF3Q9H094 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.1■■□□□ 1.61
NBPF3Q9H094 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NBPF3Q9H094 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NBPF3Q9H094 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NBPF3Q9H094 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NBPF3Q9H094 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NBPF3Q9H094 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NBPF3Q9H094 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NBPF3Q9H094 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NBPF3Q9H094 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NBPF3Q9H094 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
NBPF3Q9H094 AC138907.5-202ENST00000569484 235 ntBASIC25.09■■□□□ 1.61
NBPF3Q9H094 AC066615.1-201ENST00000640911 628 ntBASIC25.09■■□□□ 1.61
NBPF3Q9H094 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.09■■□□□ 1.61
NBPF3Q9H094 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NBPF3Q9H094 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NBPF3Q9H094 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.09■■□□□ 1.61
NBPF3Q9H094 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.09■■□□□ 1.61
NBPF3Q9H094 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
NBPF3Q9H094 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.08■■□□□ 1.61
NBPF3Q9H094 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
NBPF3Q9H094 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NBPF3Q9H094 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.08■■□□□ 1.61
NBPF3Q9H094 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.08■■□□□ 1.61
NBPF3Q9H094 AC010141.2-201ENST00000452426 721 ntBASIC25.08■■□□□ 1.61
NBPF3Q9H094 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.08■■□□□ 1.61
NBPF3Q9H094 BID-214ENST00000617586 542 ntTSL 5 BASIC25.08■■□□□ 1.61
NBPF3Q9H094 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.08■■□□□ 1.61
NBPF3Q9H094 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.08■■□□□ 1.61
NBPF3Q9H094 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
NBPF3Q9H094 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NBPF3Q9H094 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
NBPF3Q9H094 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
NBPF3Q9H094 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
NBPF3Q9H094 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
NBPF3Q9H094 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.07■■□□□ 1.6
NBPF3Q9H094 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NBPF3Q9H094 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
NBPF3Q9H094 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NBPF3Q9H094 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.07■■□□□ 1.6
NBPF3Q9H094 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.07■■□□□ 1.6
NBPF3Q9H094 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.07■■□□□ 1.6
NBPF3Q9H094 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.07■■□□□ 1.6
NBPF3Q9H094 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC25.07■■□□□ 1.6
NBPF3Q9H094 AP001160.3-201ENST00000601484 763 ntBASIC25.07■■□□□ 1.6
NBPF3Q9H094 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
NBPF3Q9H094 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NBPF3Q9H094 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NBPF3Q9H094 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.06■■□□□ 1.6
NBPF3Q9H094 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.06■■□□□ 1.6
NBPF3Q9H094 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NBPF3Q9H094 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.06■■□□□ 1.6
NBPF3Q9H094 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.06■■□□□ 1.6
NBPF3Q9H094 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.06■■□□□ 1.6
NBPF3Q9H094 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NBPF3Q9H094 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
NBPF3Q9H094 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NBPF3Q9H094 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NBPF3Q9H094 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
NBPF3Q9H094 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NBPF3Q9H094 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NBPF3Q9H094 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NBPF3Q9H094 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
NBPF3Q9H094 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.05■■□□□ 1.6
NBPF3Q9H094 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.05■■□□□ 1.6
NBPF3Q9H094 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
NBPF3Q9H094 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NBPF3Q9H094 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NBPF3Q9H094 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NBPF3Q9H094 CROCCP5-201ENST00000436658 830 ntBASIC25.05■■□□□ 1.6
NBPF3Q9H094 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms