Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 AC137761.2-201ENST00000561729 223 ntBASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 AC145350.3-201ENST00000569033 163 ntBASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCGF1Q9BSM1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 AL034346.1-201ENST00000568244 1277 ntBASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 AP004607.4-201ENST00000530158 1459 ntBASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PCGF1Q9BSM1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 KRT19P1-201ENST00000405746 1186 ntBASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCGF1Q9BSM1 C11orf96-202ENST00000528572 1834 ntBASIC17.58■□□□□ 0.41
PCGF1Q9BSM1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 KRT18P61-201ENST00000585825 1298 ntBASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 AC092437.1-201ENST00000624794 1048 ntBASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PCGF1Q9BSM1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 KRT87P-202ENST00000534226 1464 ntBASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCGF1Q9BSM1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCGF1Q9BSM1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF1Q9BSM1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCGF1Q9BSM1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms