Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb1Q91Y08 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb1Q91Y08 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb1Q91Y08 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb1Q91Y08 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Pcdhb1Q91Y08 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdhb1Q91Y08 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb1Q91Y08 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb1Q91Y08 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb1Q91Y08 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.27■□□□□ 0.68
Pcdhb1Q91Y08 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb1Q91Y08 Gm18284-201ENSMUST00000172604 624 ntBASIC19.27■□□□□ 0.68
Pcdhb1Q91Y08 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.27■□□□□ 0.68
Pcdhb1Q91Y08 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb1Q91Y08 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhb1Q91Y08 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Pcdhb1Q91Y08 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb1Q91Y08 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb1Q91Y08 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
Pcdhb1Q91Y08 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb1Q91Y08 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb1Q91Y08 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Gm7514-201ENSMUST00000209475 934 ntBASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Pcdhb1Q91Y08 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb1Q91Y08 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb1Q91Y08 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb1Q91Y08 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb1Q91Y08 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Pcdhb1Q91Y08 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcdhb1Q91Y08 Gm6420-201ENSMUST00000193885 723 ntBASIC19.24■□□□□ 0.67
Pcdhb1Q91Y08 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb1Q91Y08 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb1Q91Y08 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb1Q91Y08 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb1Q91Y08 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb1Q91Y08 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb1Q91Y08 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb1Q91Y08 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb1Q91Y08 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb1Q91Y08 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdhb1Q91Y08 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb1Q91Y08 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb1Q91Y08 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb1Q91Y08 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb1Q91Y08 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb1Q91Y08 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb1Q91Y08 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.22■□□□□ 0.67
Pcdhb1Q91Y08 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.22■□□□□ 0.67
Pcdhb1Q91Y08 AV356131-201ENSMUST00000206201 750 ntBASIC19.22■□□□□ 0.67
Pcdhb1Q91Y08 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.22■□□□□ 0.67
Pcdhb1Q91Y08 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb1Q91Y08 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb1Q91Y08 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb1Q91Y08 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb1Q91Y08 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb1Q91Y08 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb1Q91Y08 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb1Q91Y08 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb1Q91Y08 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb1Q91Y08 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb1Q91Y08 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhb1Q91Y08 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb1Q91Y08 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb1Q91Y08 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb1Q91Y08 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhb1Q91Y08 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb1Q91Y08 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb1Q91Y08 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb1Q91Y08 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb1Q91Y08 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb1Q91Y08 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms