Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.66■□□□□ 0.26
Rab40bQ8VHP8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40bQ8VHP8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40bQ8VHP8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40bQ8VHP8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40bQ8VHP8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40bQ8VHP8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40bQ8VHP8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab40bQ8VHP8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Spcs1-204ENSMUST00000226782 949 ntBASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab40bQ8VHP8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.64■□□□□ 0.26
Rab40bQ8VHP8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Rab40bQ8VHP8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40bQ8VHP8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40bQ8VHP8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40bQ8VHP8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40bQ8VHP8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40bQ8VHP8 Gm12922-201ENSMUST00000120626 809 ntBASIC16.64■□□□□ 0.25
Rab40bQ8VHP8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40bQ8VHP8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.64■□□□□ 0.25
Rab40bQ8VHP8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.64■□□□□ 0.25
Rab40bQ8VHP8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.64■□□□□ 0.25
Rab40bQ8VHP8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40bQ8VHP8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40bQ8VHP8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab40bQ8VHP8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab40bQ8VHP8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40bQ8VHP8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40bQ8VHP8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40bQ8VHP8 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.62■□□□□ 0.25
Rab40bQ8VHP8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rab40bQ8VHP8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40bQ8VHP8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rab40bQ8VHP8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40bQ8VHP8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Rab40bQ8VHP8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.62■□□□□ 0.25
Rab40bQ8VHP8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40bQ8VHP8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40bQ8VHP8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rab40bQ8VHP8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab40bQ8VHP8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab40bQ8VHP8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms