Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Gtf3c5Q8R2T8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.62■■□□□ 1.05
Gtf3c5Q8R2T8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Gtf3c5Q8R2T8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gtf3c5Q8R2T8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gtf3c5Q8R2T8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gtf3c5Q8R2T8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Gtf3c5Q8R2T8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Gtf3c5Q8R2T8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Gtf3c5Q8R2T8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gtf3c5Q8R2T8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gtf3c5Q8R2T8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gtf3c5Q8R2T8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Gtf3c5Q8R2T8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gtf3c5Q8R2T8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Gtf3c5Q8R2T8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gtf3c5Q8R2T8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gtf3c5Q8R2T8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gtf3c5Q8R2T8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gtf3c5Q8R2T8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Gtf3c5Q8R2T8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gtf3c5Q8R2T8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gtf3c5Q8R2T8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.6■■□□□ 1.05
Gtf3c5Q8R2T8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gtf3c5Q8R2T8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gtf3c5Q8R2T8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gtf3c5Q8R2T8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gtf3c5Q8R2T8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Gtf3c5Q8R2T8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gtf3c5Q8R2T8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
Gtf3c5Q8R2T8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gtf3c5Q8R2T8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gtf3c5Q8R2T8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gtf3c5Q8R2T8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Gtf3c5Q8R2T8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gtf3c5Q8R2T8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gtf3c5Q8R2T8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.59■■□□□ 1.05
Gtf3c5Q8R2T8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gtf3c5Q8R2T8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gtf3c5Q8R2T8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gtf3c5Q8R2T8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gtf3c5Q8R2T8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gtf3c5Q8R2T8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gtf3c5Q8R2T8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Gtf3c5Q8R2T8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gtf3c5Q8R2T8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gtf3c5Q8R2T8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Gtf3c5Q8R2T8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
Gtf3c5Q8R2T8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Gtf3c5Q8R2T8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Gtf3c5Q8R2T8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gtf3c5Q8R2T8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gtf3c5Q8R2T8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gtf3c5Q8R2T8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Gtf3c5Q8R2T8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gtf3c5Q8R2T8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gtf3c5Q8R2T8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gtf3c5Q8R2T8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gtf3c5Q8R2T8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Gtf3c5Q8R2T8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gtf3c5Q8R2T8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gtf3c5Q8R2T8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
Gtf3c5Q8R2T8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gtf3c5Q8R2T8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Gtf3c5Q8R2T8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gtf3c5Q8R2T8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Gtf3c5Q8R2T8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Gtf3c5Q8R2T8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Gtf3c5Q8R2T8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.56■■□□□ 1.04
Gtf3c5Q8R2T8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Gtf3c5Q8R2T8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.56■■□□□ 1.04
Gtf3c5Q8R2T8 Mir5133-201ENSMUST00000174955 77 ntBASIC21.56■■□□□ 1.04
Gtf3c5Q8R2T8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.56■■□□□ 1.04
Gtf3c5Q8R2T8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.56■■□□□ 1.04
Gtf3c5Q8R2T8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gtf3c5Q8R2T8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gtf3c5Q8R2T8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gtf3c5Q8R2T8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gtf3c5Q8R2T8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Gtf3c5Q8R2T8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gtf3c5Q8R2T8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Gtf3c5Q8R2T8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gtf3c5Q8R2T8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gtf3c5Q8R2T8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Gtf3c5Q8R2T8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gtf3c5Q8R2T8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.55■■□□□ 1.04
Gtf3c5Q8R2T8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Gtf3c5Q8R2T8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gtf3c5Q8R2T8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gtf3c5Q8R2T8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Gtf3c5Q8R2T8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gtf3c5Q8R2T8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 162.5 ms