Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATPAF2Q8N5M1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATPAF2Q8N5M1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATPAF2Q8N5M1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATPAF2Q8N5M1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.62■■□□□ 1.05
ATPAF2Q8N5M1 AC097381.1-201ENST00000429019 1296 ntBASIC21.62■■□□□ 1.05
ATPAF2Q8N5M1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.62■■□□□ 1.05
ATPAF2Q8N5M1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATPAF2Q8N5M1 AC053503.5-201ENST00000601508 636 ntBASIC21.62■■□□□ 1.05
ATPAF2Q8N5M1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.62■■□□□ 1.05
ATPAF2Q8N5M1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATPAF2Q8N5M1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATPAF2Q8N5M1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 MIR6821-201ENST00000617625 74 ntBASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.6■■□□□ 1.05
ATPAF2Q8N5M1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.59■■□□□ 1.05
ATPAF2Q8N5M1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATPAF2Q8N5M1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATPAF2Q8N5M1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATPAF2Q8N5M1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATPAF2Q8N5M1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATPAF2Q8N5M1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ATPAF2Q8N5M1 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.59■■□□□ 1.05
ATPAF2Q8N5M1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ATPAF2Q8N5M1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.59■■□□□ 1.05
ATPAF2Q8N5M1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.59■■□□□ 1.05
ATPAF2Q8N5M1 AC007375.3-201ENST00000600936 2314 ntBASIC21.59■■□□□ 1.05
ATPAF2Q8N5M1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 AC026310.3-201ENST00000625186 2373 ntBASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 DUX4L2-201ENST00000561772 1275 ntBASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 DUX4L6-201ENST00000626483 1275 ntBASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 DUX4L1-201ENST00000627662 1275 ntBASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 DUX4L8-201ENST00000629013 1275 ntBASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 DUX4L3-201ENST00000630187 1275 ntBASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 DUX4L7-201ENST00000630678 1275 ntBASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 DUX4L5-201ENST00000630834 1275 ntBASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.58■■□□□ 1.05
ATPAF2Q8N5M1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.58■■□□□ 1.04
ATPAF2Q8N5M1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
ATPAF2Q8N5M1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATPAF2Q8N5M1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATPAF2Q8N5M1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 RARRES2P6-201ENST00000567333 442 ntBASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 AC087623.3-201ENST00000607047 1098 ntBASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATPAF2Q8N5M1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms