Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk3Q8K3G5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vrk3Q8K3G5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Gm27801-201ENSMUST00000184174 223 ntBASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vrk3Q8K3G5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk3Q8K3G5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk3Q8K3G5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Vrk3Q8K3G5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk3Q8K3G5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk3Q8K3G5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk3Q8K3G5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk3Q8K3G5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk3Q8K3G5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk3Q8K3G5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk3Q8K3G5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.65■□□□□ 0.1
Vrk3Q8K3G5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk3Q8K3G5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.65■□□□□ 0.1
Vrk3Q8K3G5 Gm43060-201ENSMUST00000200621 289 ntBASIC15.65■□□□□ 0.1
Vrk3Q8K3G5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk3Q8K3G5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk3Q8K3G5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk3Q8K3G5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms