Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.2■□□□□ 0.5
Cabcoco1Q8CDT7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cabcoco1Q8CDT7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.2■□□□□ 0.5
Cabcoco1Q8CDT7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.2■□□□□ 0.5
Cabcoco1Q8CDT7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cabcoco1Q8CDT7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cabcoco1Q8CDT7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cabcoco1Q8CDT7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cabcoco1Q8CDT7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.2■□□□□ 0.5
Cabcoco1Q8CDT7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cabcoco1Q8CDT7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cabcoco1Q8CDT7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cabcoco1Q8CDT7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cabcoco1Q8CDT7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cabcoco1Q8CDT7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cabcoco1Q8CDT7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cabcoco1Q8CDT7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cabcoco1Q8CDT7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.19■□□□□ 0.5
Cabcoco1Q8CDT7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cabcoco1Q8CDT7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cabcoco1Q8CDT7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cabcoco1Q8CDT7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cabcoco1Q8CDT7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cabcoco1Q8CDT7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cabcoco1Q8CDT7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cabcoco1Q8CDT7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cabcoco1Q8CDT7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cabcoco1Q8CDT7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cabcoco1Q8CDT7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cabcoco1Q8CDT7 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.17■□□□□ 0.5
Cabcoco1Q8CDT7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cabcoco1Q8CDT7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cabcoco1Q8CDT7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cabcoco1Q8CDT7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cabcoco1Q8CDT7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cabcoco1Q8CDT7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cabcoco1Q8CDT7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cabcoco1Q8CDT7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cabcoco1Q8CDT7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Cabcoco1Q8CDT7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cabcoco1Q8CDT7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.14■□□□□ 0.5
Cabcoco1Q8CDT7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cabcoco1Q8CDT7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms