Protein–RNA interactions for Protein: Q8C5T8

Ccdc113, Coiled-coil domain-containing protein 113, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc113Q8C5T8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc113Q8C5T8 Mir5133-201ENSMUST00000174955 77 ntBASIC20.59■□□□□ 0.89
Ccdc113Q8C5T8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.59■□□□□ 0.89
Ccdc113Q8C5T8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc113Q8C5T8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc113Q8C5T8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.59■□□□□ 0.89
Ccdc113Q8C5T8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc113Q8C5T8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc113Q8C5T8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc113Q8C5T8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc113Q8C5T8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc113Q8C5T8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc113Q8C5T8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc113Q8C5T8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc113Q8C5T8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc113Q8C5T8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.58■□□□□ 0.89
Ccdc113Q8C5T8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc113Q8C5T8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.58■□□□□ 0.89
Ccdc113Q8C5T8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.58■□□□□ 0.89
Ccdc113Q8C5T8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc113Q8C5T8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc113Q8C5T8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc113Q8C5T8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Ccdc113Q8C5T8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.58■□□□□ 0.88
Ccdc113Q8C5T8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc113Q8C5T8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc113Q8C5T8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc113Q8C5T8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.88
Ccdc113Q8C5T8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc113Q8C5T8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
Ccdc113Q8C5T8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc113Q8C5T8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc113Q8C5T8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ccdc113Q8C5T8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc113Q8C5T8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.56■□□□□ 0.88
Ccdc113Q8C5T8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ccdc113Q8C5T8 Gm6211-202ENSMUST00000167849 925 ntBASIC20.56■□□□□ 0.88
Ccdc113Q8C5T8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc113Q8C5T8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc113Q8C5T8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc113Q8C5T8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ccdc113Q8C5T8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc113Q8C5T8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc113Q8C5T8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc113Q8C5T8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc113Q8C5T8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc113Q8C5T8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc113Q8C5T8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc113Q8C5T8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc113Q8C5T8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Ccdc113Q8C5T8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc113Q8C5T8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.55■□□□□ 0.88
Ccdc113Q8C5T8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc113Q8C5T8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc113Q8C5T8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc113Q8C5T8 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.55■□□□□ 0.88
Ccdc113Q8C5T8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Ccdc113Q8C5T8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc113Q8C5T8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc113Q8C5T8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc113Q8C5T8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc113Q8C5T8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc113Q8C5T8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc113Q8C5T8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc113Q8C5T8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc113Q8C5T8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc113Q8C5T8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc113Q8C5T8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc113Q8C5T8 Gm10602-201ENSMUST00000098239 609 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms