Protein–RNA interactions for Protein: Q8C080

Snx16, Sorting nexin-16, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx16Q8C080 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx16Q8C080 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx16Q8C080 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx16Q8C080 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.17■□□□□ 0.5
Snx16Q8C080 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx16Q8C080 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx16Q8C080 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.17■□□□□ 0.5
Snx16Q8C080 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx16Q8C080 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Snx16Q8C080 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.17■□□□□ 0.5
Snx16Q8C080 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx16Q8C080 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx16Q8C080 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx16Q8C080 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx16Q8C080 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Snx16Q8C080 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Snx16Q8C080 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Snx16Q8C080 Gm7860-201ENSMUST00000121190 879 ntBASIC18.16■□□□□ 0.5
Snx16Q8C080 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Snx16Q8C080 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.16■□□□□ 0.5
Snx16Q8C080 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.16■□□□□ 0.5
Snx16Q8C080 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx16Q8C080 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx16Q8C080 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx16Q8C080 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Snx16Q8C080 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx16Q8C080 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Snx16Q8C080 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx16Q8C080 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Snx16Q8C080 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx16Q8C080 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx16Q8C080 Gm27011-201ENSMUST00000182352 972 ntBASIC18.15■□□□□ 0.5
Snx16Q8C080 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Snx16Q8C080 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx16Q8C080 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Snx16Q8C080 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx16Q8C080 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx16Q8C080 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx16Q8C080 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx16Q8C080 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx16Q8C080 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx16Q8C080 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.15■□□□□ 0.5
Snx16Q8C080 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Snx16Q8C080 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Snx16Q8C080 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Snx16Q8C080 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx16Q8C080 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx16Q8C080 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx16Q8C080 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Snx16Q8C080 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Snx16Q8C080 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx16Q8C080 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx16Q8C080 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx16Q8C080 Gm7290-201ENSMUST00000104990 617 ntBASIC18.14■□□□□ 0.49
Snx16Q8C080 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.14■□□□□ 0.49
Snx16Q8C080 Gm12918-201ENSMUST00000120234 636 ntBASIC18.14■□□□□ 0.49
Snx16Q8C080 Gm15710-201ENSMUST00000121821 636 ntBASIC18.14■□□□□ 0.49
Snx16Q8C080 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.14■□□□□ 0.49
Snx16Q8C080 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx16Q8C080 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.14■□□□□ 0.49
Snx16Q8C080 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.14■□□□□ 0.49
Snx16Q8C080 Gm6420-201ENSMUST00000193885 723 ntBASIC18.14■□□□□ 0.49
Snx16Q8C080 Gm5075-201ENSMUST00000196916 622 ntBASIC18.14■□□□□ 0.49
Snx16Q8C080 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.14■□□□□ 0.49
Snx16Q8C080 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.14■□□□□ 0.49
Snx16Q8C080 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Snx16Q8C080 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx16Q8C080 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx16Q8C080 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Snx16Q8C080 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Snx16Q8C080 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Snx16Q8C080 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snx16Q8C080 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snx16Q8C080 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snx16Q8C080 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.13■□□□□ 0.49
Snx16Q8C080 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Snx16Q8C080 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snx16Q8C080 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snx16Q8C080 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Snx16Q8C080 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Snx16Q8C080 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.13■□□□□ 0.49
Snx16Q8C080 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Snx16Q8C080 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.13■□□□□ 0.49
Snx16Q8C080 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Snx16Q8C080 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.13■□□□□ 0.49
Snx16Q8C080 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Snx16Q8C080 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Snx16Q8C080 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Snx16Q8C080 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snx16Q8C080 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Snx16Q8C080 Golph3-205ENSMUST00000228671 2842 ntBASIC18.13■□□□□ 0.49
Snx16Q8C080 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Snx16Q8C080 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snx16Q8C080 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Snx16Q8C080 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Snx16Q8C080 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snx16Q8C080 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Snx16Q8C080 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snx16Q8C080 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Snx16Q8C080 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms