Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ush1gQ80T11 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ush1gQ80T11 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.27■□□□□ 0.84
Ush1gQ80T11 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.27■□□□□ 0.84
Ush1gQ80T11 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.27■□□□□ 0.84
Ush1gQ80T11 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ush1gQ80T11 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ush1gQ80T11 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ush1gQ80T11 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Ush1gQ80T11 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ush1gQ80T11 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.26■□□□□ 0.83
Ush1gQ80T11 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ush1gQ80T11 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Ush1gQ80T11 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.26■□□□□ 0.83
Ush1gQ80T11 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ush1gQ80T11 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.26■□□□□ 0.83
Ush1gQ80T11 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ush1gQ80T11 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ush1gQ80T11 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ush1gQ80T11 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ush1gQ80T11 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ush1gQ80T11 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ush1gQ80T11 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ush1gQ80T11 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.25■□□□□ 0.83
Ush1gQ80T11 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ush1gQ80T11 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.25■□□□□ 0.83
Ush1gQ80T11 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ush1gQ80T11 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ush1gQ80T11 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ush1gQ80T11 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ush1gQ80T11 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ush1gQ80T11 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ush1gQ80T11 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ush1gQ80T11 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ush1gQ80T11 Gm18666-201ENSMUST00000190039 958 ntBASIC20.24■□□□□ 0.83
Ush1gQ80T11 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ush1gQ80T11 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ush1gQ80T11 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ush1gQ80T11 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ush1gQ80T11 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.24■□□□□ 0.83
Ush1gQ80T11 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ush1gQ80T11 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ush1gQ80T11 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ush1gQ80T11 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ush1gQ80T11 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ush1gQ80T11 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ush1gQ80T11 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ush1gQ80T11 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ush1gQ80T11 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Ush1gQ80T11 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ush1gQ80T11 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.23■□□□□ 0.83
Ush1gQ80T11 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ush1gQ80T11 Dio3-201ENSMUST00000097228 1449 ntBASIC20.23■□□□□ 0.83
Ush1gQ80T11 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ush1gQ80T11 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ush1gQ80T11 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.23■□□□□ 0.83
Ush1gQ80T11 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ush1gQ80T11 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ush1gQ80T11 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ush1gQ80T11 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ush1gQ80T11 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.22■□□□□ 0.83
Ush1gQ80T11 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ush1gQ80T11 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ush1gQ80T11 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ush1gQ80T11 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ush1gQ80T11 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.22■□□□□ 0.83
Ush1gQ80T11 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ush1gQ80T11 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ush1gQ80T11 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ush1gQ80T11 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ush1gQ80T11 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ush1gQ80T11 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ush1gQ80T11 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.2■□□□□ 0.82
Ush1gQ80T11 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ush1gQ80T11 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.2■□□□□ 0.82
Ush1gQ80T11 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ush1gQ80T11 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.2■□□□□ 0.82
Ush1gQ80T11 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ush1gQ80T11 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ush1gQ80T11 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ush1gQ80T11 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ush1gQ80T11 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ush1gQ80T11 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ush1gQ80T11 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms