Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sycp1Q62209 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sycp1Q62209 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sycp1Q62209 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Sycp1Q62209 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Sycp1Q62209 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.71■□□□□ 0.91
Sycp1Q62209 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sycp1Q62209 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sycp1Q62209 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sycp1Q62209 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sycp1Q62209 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sycp1Q62209 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sycp1Q62209 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sycp1Q62209 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sycp1Q62209 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.7■□□□□ 0.9
Sycp1Q62209 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sycp1Q62209 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sycp1Q62209 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sycp1Q62209 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sycp1Q62209 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sycp1Q62209 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.69■□□□□ 0.9
Sycp1Q62209 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sycp1Q62209 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sycp1Q62209 Gm13146-201ENSMUST00000118508 780 ntBASIC20.69■□□□□ 0.9
Sycp1Q62209 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sycp1Q62209 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sycp1Q62209 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sycp1Q62209 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sycp1Q62209 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sycp1Q62209 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sycp1Q62209 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sycp1Q62209 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Sycp1Q62209 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.68■□□□□ 0.9
Sycp1Q62209 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.68■□□□□ 0.9
Sycp1Q62209 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.68■□□□□ 0.9
Sycp1Q62209 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sycp1Q62209 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sycp1Q62209 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sycp1Q62209 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sycp1Q62209 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Sycp1Q62209 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sycp1Q62209 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sycp1Q62209 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sycp1Q62209 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sycp1Q62209 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sycp1Q62209 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.67■□□□□ 0.9
Sycp1Q62209 Gm7514-201ENSMUST00000209475 934 ntBASIC20.67■□□□□ 0.9
Sycp1Q62209 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.67■□□□□ 0.9
Sycp1Q62209 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sycp1Q62209 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sycp1Q62209 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sycp1Q62209 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Sycp1Q62209 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sycp1Q62209 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sycp1Q62209 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sycp1Q62209 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sycp1Q62209 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sycp1Q62209 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.67■□□□□ 0.9
Sycp1Q62209 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sycp1Q62209 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sycp1Q62209 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sycp1Q62209 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sycp1Q62209 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.66■□□□□ 0.9
Sycp1Q62209 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sycp1Q62209 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sycp1Q62209 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Sycp1Q62209 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sycp1Q62209 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sycp1Q62209 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sycp1Q62209 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sycp1Q62209 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sycp1Q62209 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sycp1Q62209 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sycp1Q62209 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sycp1Q62209 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sycp1Q62209 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sycp1Q62209 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.65■□□□□ 0.9
Sycp1Q62209 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sycp1Q62209 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Sycp1Q62209 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Sycp1Q62209 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sycp1Q62209 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sycp1Q62209 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sycp1Q62209 Gm10849-201ENSMUST00000100397 618 ntBASIC20.65■□□□□ 0.9
Sycp1Q62209 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sycp1Q62209 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.65■□□□□ 0.9
Sycp1Q62209 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sycp1Q62209 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Sycp1Q62209 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.65■□□□□ 0.9
Sycp1Q62209 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Sycp1Q62209 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.64■□□□□ 0.9
Sycp1Q62209 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sycp1Q62209 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Sycp1Q62209 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sycp1Q62209 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sycp1Q62209 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.64■□□□□ 0.89
Sycp1Q62209 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.64■□□□□ 0.89
Sycp1Q62209 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.64■□□□□ 0.89
Sycp1Q62209 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.64■□□□□ 0.89
Sycp1Q62209 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms