Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3-1Q5R1I8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav3-1Q5R1I8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav3-1Q5R1I8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-1Q5R1I8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-1Q5R1I8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-1Q5R1I8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 AC157572.2-201ENSMUST00000226970 908 ntBASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav3-1Q5R1I8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav3-1Q5R1I8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-1Q5R1I8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Trav3-1Q5R1I8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-1Q5R1I8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-1Q5R1I8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav3-1Q5R1I8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms