Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
SgcdP82347 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcdP82347 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcdP82347 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SgcdP82347 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcdP82347 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcdP82347 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SgcdP82347 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcdP82347 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcdP82347 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SgcdP82347 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SgcdP82347 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SgcdP82347 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.11■□□□□ 0.33
SgcdP82347 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.11■□□□□ 0.33
SgcdP82347 Gm43017-201ENSMUST00000198296 752 ntBASIC17.11■□□□□ 0.33
SgcdP82347 Gm9870-201ENSMUST00000063874 645 ntBASIC17.11■□□□□ 0.33
SgcdP82347 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.11■□□□□ 0.33
SgcdP82347 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SgcdP82347 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcdP82347 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcdP82347 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcdP82347 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SgcdP82347 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcdP82347 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.1■□□□□ 0.33
SgcdP82347 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SgcdP82347 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.1■□□□□ 0.33
SgcdP82347 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SgcdP82347 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SgcdP82347 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.1■□□□□ 0.33
SgcdP82347 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SgcdP82347 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcdP82347 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcdP82347 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcdP82347 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SgcdP82347 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcdP82347 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcdP82347 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SgcdP82347 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcdP82347 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcdP82347 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcdP82347 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SgcdP82347 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.09■□□□□ 0.33
SgcdP82347 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcdP82347 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcdP82347 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcdP82347 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SgcdP82347 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SgcdP82347 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SgcdP82347 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SgcdP82347 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SgcdP82347 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SgcdP82347 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SgcdP82347 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SgcdP82347 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SgcdP82347 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SgcdP82347 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SgcdP82347 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.08■□□□□ 0.32
SgcdP82347 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.08■□□□□ 0.32
SgcdP82347 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
SgcdP82347 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SgcdP82347 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SgcdP82347 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SgcdP82347 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SgcdP82347 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SgcdP82347 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SgcdP82347 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SgcdP82347 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SgcdP82347 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SgcdP82347 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SgcdP82347 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SgcdP82347 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SgcdP82347 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SgcdP82347 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.07■□□□□ 0.32
SgcdP82347 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SgcdP82347 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SgcdP82347 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SgcdP82347 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SgcdP82347 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.06■□□□□ 0.32
SgcdP82347 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SgcdP82347 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SgcdP82347 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SgcdP82347 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SgcdP82347 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms