Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ccl1P10146 Gm9870-201ENSMUST00000063874 645 ntBASIC14.43□□□□□ -0.1
Ccl1P10146 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl1P10146 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl1P10146 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl1P10146 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl1P10146 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccl1P10146 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccl1P10146 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl1P10146 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl1P10146 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Ccl1P10146 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl1P10146 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.42□□□□□ -0.1
Ccl1P10146 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccl1P10146 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccl1P10146 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl1P10146 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.41□□□□□ -0.1
Ccl1P10146 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.41□□□□□ -0.1
Ccl1P10146 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl1P10146 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccl1P10146 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl1P10146 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccl1P10146 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl1P10146 Gm13238-201ENSMUST00000117655 780 ntBASIC14.41□□□□□ -0.1
Ccl1P10146 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.41□□□□□ -0.1
Ccl1P10146 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccl1P10146 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.41□□□□□ -0.1
Ccl1P10146 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccl1P10146 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccl1P10146 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl1P10146 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl1P10146 Gm10232-201ENSMUST00000089221 720 ntBASIC14.41□□□□□ -0.1
Ccl1P10146 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl1P10146 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl1P10146 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl1P10146 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl1P10146 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl1P10146 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl1P10146 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
Ccl1P10146 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl1P10146 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
Ccl1P10146 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl1P10146 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl1P10146 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl1P10146 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.4□□□□□ -0.1
Ccl1P10146 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.4□□□□□ -0.1
Ccl1P10146 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl1P10146 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl1P10146 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl1P10146 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl1P10146 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccl1P10146 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl1P10146 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccl1P10146 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.4□□□□□ -0.1
Ccl1P10146 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccl1P10146 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.4□□□□□ -0.1
Ccl1P10146 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Ccl1P10146 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccl1P10146 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccl1P10146 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccl1P10146 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.39□□□□□ -0.11
Ccl1P10146 Gm40881-201ENSMUST00000223397 166 ntBASIC14.39□□□□□ -0.11
Ccl1P10146 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccl1P10146 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.38□□□□□ -0.11
Ccl1P10146 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.38□□□□□ -0.11
Ccl1P10146 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccl1P10146 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccl1P10146 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Ccl1P10146 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl1P10146 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccl1P10146 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms