Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PrnpP04925 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.29■□□□□ 0.68
PrnpP04925 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.29■□□□□ 0.68
PrnpP04925 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PrnpP04925 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PrnpP04925 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.29■□□□□ 0.68
PrnpP04925 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PrnpP04925 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PrnpP04925 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PrnpP04925 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PrnpP04925 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PrnpP04925 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PrnpP04925 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PrnpP04925 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PrnpP04925 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PrnpP04925 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PrnpP04925 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PrnpP04925 Mir5122-201ENSMUST00000175004 89 ntBASIC19.28■□□□□ 0.68
PrnpP04925 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PrnpP04925 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PrnpP04925 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PrnpP04925 Zfp783-201ENSMUST00000095946 670 ntBASIC19.28■□□□□ 0.68
PrnpP04925 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PrnpP04925 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PrnpP04925 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PrnpP04925 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PrnpP04925 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PrnpP04925 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.28■□□□□ 0.68
PrnpP04925 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PrnpP04925 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PrnpP04925 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
PrnpP04925 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PrnpP04925 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PrnpP04925 Gm11643-201ENSMUST00000119578 864 ntBASIC19.27■□□□□ 0.68
PrnpP04925 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.27■□□□□ 0.68
PrnpP04925 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.27■□□□□ 0.68
PrnpP04925 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PrnpP04925 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PrnpP04925 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PrnpP04925 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PrnpP04925 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PrnpP04925 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PrnpP04925 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
PrnpP04925 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PrnpP04925 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PrnpP04925 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PrnpP04925 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PrnpP04925 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PrnpP04925 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PrnpP04925 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.26■□□□□ 0.67
PrnpP04925 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PrnpP04925 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PrnpP04925 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PrnpP04925 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PrnpP04925 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PrnpP04925 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PrnpP04925 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PrnpP04925 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PrnpP04925 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PrnpP04925 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.25■□□□□ 0.67
PrnpP04925 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PrnpP04925 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PrnpP04925 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PrnpP04925 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PrnpP04925 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PrnpP04925 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PrnpP04925 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PrnpP04925 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PrnpP04925 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PrnpP04925 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PrnpP04925 Gm10138-203ENSMUST00000206952 366 ntBASIC19.24■□□□□ 0.67
PrnpP04925 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.24■□□□□ 0.67
PrnpP04925 Mtag2-201ENSMUST00000058665 714 ntBASIC19.24■□□□□ 0.67
PrnpP04925 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PrnpP04925 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
PrnpP04925 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PrnpP04925 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PrnpP04925 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PrnpP04925 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PrnpP04925 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PrnpP04925 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PrnpP04925 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PrnpP04925 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.23■□□□□ 0.67
PrnpP04925 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PrnpP04925 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PrnpP04925 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.23■□□□□ 0.67
PrnpP04925 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PrnpP04925 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PrnpP04925 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PrnpP04925 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PrnpP04925 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PrnpP04925 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PrnpP04925 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PrnpP04925 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PrnpP04925 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PrnpP04925 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PrnpP04925 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PrnpP04925 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PrnpP04925 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.22■□□□□ 0.67
PrnpP04925 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms