Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops3O88543 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Cops3O88543 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cops3O88543 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Cops3O88543 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cops3O88543 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cops3O88543 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops3O88543 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cops3O88543 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops3O88543 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cops3O88543 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Cops3O88543 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cops3O88543 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops3O88543 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.56■□□□□ 0.24
Cops3O88543 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.56■□□□□ 0.24
Cops3O88543 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cops3O88543 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops3O88543 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cops3O88543 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops3O88543 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops3O88543 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.56■□□□□ 0.24
Cops3O88543 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cops3O88543 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cops3O88543 Mir7075-201ENSMUST00000184187 82 ntBASIC16.56■□□□□ 0.24
Cops3O88543 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cops3O88543 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops3O88543 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.56■□□□□ 0.24
Cops3O88543 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cops3O88543 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops3O88543 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.55■□□□□ 0.24
Cops3O88543 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops3O88543 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cops3O88543 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cops3O88543 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops3O88543 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops3O88543 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops3O88543 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops3O88543 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops3O88543 Gm43173-201ENSMUST00000202246 593 ntBASIC16.55■□□□□ 0.24
Cops3O88543 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops3O88543 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.55■□□□□ 0.24
Cops3O88543 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops3O88543 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cops3O88543 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops3O88543 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops3O88543 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.55■□□□□ 0.24
Cops3O88543 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops3O88543 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops3O88543 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops3O88543 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cops3O88543 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops3O88543 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops3O88543 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.54■□□□□ 0.24
Cops3O88543 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops3O88543 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cops3O88543 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cops3O88543 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops3O88543 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops3O88543 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.54■□□□□ 0.24
Cops3O88543 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Cops3O88543 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops3O88543 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops3O88543 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.54■□□□□ 0.24
Cops3O88543 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.54■□□□□ 0.24
Cops3O88543 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cops3O88543 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cops3O88543 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cops3O88543 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cops3O88543 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cops3O88543 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops3O88543 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cops3O88543 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.53■□□□□ 0.24
Cops3O88543 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Cops3O88543 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops3O88543 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops3O88543 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops3O88543 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops3O88543 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cops3O88543 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.53■□□□□ 0.24
Cops3O88543 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops3O88543 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.53■□□□□ 0.24
Cops3O88543 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.53■□□□□ 0.24
Cops3O88543 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.53■□□□□ 0.24
Cops3O88543 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops3O88543 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.53■□□□□ 0.24
Cops3O88543 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops3O88543 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Cops3O88543 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops3O88543 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops3O88543 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops3O88543 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops3O88543 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops3O88543 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops3O88543 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops3O88543 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops3O88543 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cops3O88543 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cops3O88543 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops3O88543 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cops3O88543 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms