Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Ldb2O55203 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ldb2O55203 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ldb2O55203 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Ldb2O55203 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Ldb2O55203 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ldb2O55203 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.45■□□□□ 0.54
Ldb2O55203 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ldb2O55203 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ldb2O55203 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.45■□□□□ 0.54
Ldb2O55203 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ldb2O55203 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ldb2O55203 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ldb2O55203 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ldb2O55203 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ldb2O55203 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ldb2O55203 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.44■□□□□ 0.54
Ldb2O55203 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ldb2O55203 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ldb2O55203 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ldb2O55203 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ldb2O55203 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Ldb2O55203 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ldb2O55203 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ldb2O55203 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ldb2O55203 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.43■□□□□ 0.54
Ldb2O55203 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.43■□□□□ 0.54
Ldb2O55203 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ldb2O55203 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ldb2O55203 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ldb2O55203 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.42■□□□□ 0.54
Ldb2O55203 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.42■□□□□ 0.54
Ldb2O55203 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ldb2O55203 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.42■□□□□ 0.54
Ldb2O55203 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ldb2O55203 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ldb2O55203 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ldb2O55203 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ldb2O55203 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ldb2O55203 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ldb2O55203 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ldb2O55203 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ldb2O55203 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ldb2O55203 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ldb2O55203 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ldb2O55203 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Ldb2O55203 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.41■□□□□ 0.54
Ldb2O55203 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ldb2O55203 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ldb2O55203 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.41■□□□□ 0.54
Ldb2O55203 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ldb2O55203 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ldb2O55203 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ldb2O55203 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ldb2O55203 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ldb2O55203 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ldb2O55203 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.4■□□□□ 0.54
Ldb2O55203 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ldb2O55203 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.4■□□□□ 0.54
Ldb2O55203 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ldb2O55203 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ldb2O55203 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ldb2O55203 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.4■□□□□ 0.54
Ldb2O55203 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Ldb2O55203 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ldb2O55203 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ldb2O55203 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ldb2O55203 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ldb2O55203 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ldb2O55203 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Ldb2O55203 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb2O55203 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb2O55203 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.39■□□□□ 0.53
Ldb2O55203 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.39■□□□□ 0.53
Ldb2O55203 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb2O55203 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb2O55203 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb2O55203 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb2O55203 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb2O55203 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb2O55203 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.38■□□□□ 0.53
Ldb2O55203 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb2O55203 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb2O55203 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb2O55203 Gm27405-201ENSMUST00000184201 112 ntBASIC18.38■□□□□ 0.53
Ldb2O55203 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb2O55203 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb2O55203 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb2O55203 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ldb2O55203 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.38■□□□□ 0.53
Ldb2O55203 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.38■□□□□ 0.53
Ldb2O55203 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb2O55203 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.37■□□□□ 0.53
Ldb2O55203 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ldb2O55203 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ldb2O55203 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ldb2O55203 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ldb2O55203 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ldb2O55203 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.37■□□□□ 0.53
Ldb2O55203 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms