Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
9930021J03RikH3BKP8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
9930021J03RikH3BKP8 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.32■□□□□ 0.36
9930021J03RikH3BKP8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
9930021J03RikH3BKP8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
9930021J03RikH3BKP8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
9930021J03RikH3BKP8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Gm5408-201ENSMUST00000197998 747 ntBASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Gm4968-201ENSMUST00000071458 858 ntBASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
9930021J03RikH3BKP8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
9930021J03RikH3BKP8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
9930021J03RikH3BKP8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.29■□□□□ 0.36
9930021J03RikH3BKP8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
9930021J03RikH3BKP8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.29■□□□□ 0.36
9930021J03RikH3BKP8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
9930021J03RikH3BKP8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
9930021J03RikH3BKP8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
9930021J03RikH3BKP8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
9930021J03RikH3BKP8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
9930021J03RikH3BKP8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
9930021J03RikH3BKP8 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Gm12441-201ENSMUST00000121806 588 ntBASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
9930021J03RikH3BKP8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
9930021J03RikH3BKP8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
9930021J03RikH3BKP8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
9930021J03RikH3BKP8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
9930021J03RikH3BKP8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
9930021J03RikH3BKP8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
9930021J03RikH3BKP8 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.27■□□□□ 0.36
9930021J03RikH3BKP8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
9930021J03RikH3BKP8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.27■□□□□ 0.36
9930021J03RikH3BKP8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.27■□□□□ 0.36
9930021J03RikH3BKP8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.27■□□□□ 0.36
9930021J03RikH3BKP8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.27■□□□□ 0.36
9930021J03RikH3BKP8 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.27■□□□□ 0.36
9930021J03RikH3BKP8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
9930021J03RikH3BKP8 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.27■□□□□ 0.35
9930021J03RikH3BKP8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
9930021J03RikH3BKP8 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.26■□□□□ 0.35
9930021J03RikH3BKP8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
9930021J03RikH3BKP8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
9930021J03RikH3BKP8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
9930021J03RikH3BKP8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
9930021J03RikH3BKP8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
9930021J03RikH3BKP8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
9930021J03RikH3BKP8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
9930021J03RikH3BKP8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
9930021J03RikH3BKP8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
9930021J03RikH3BKP8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
9930021J03RikH3BKP8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
9930021J03RikH3BKP8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
9930021J03RikH3BKP8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
9930021J03RikH3BKP8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms