Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav14n-3A0A075B645 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav14n-3A0A075B645 Gm43566-201ENSMUST00000196851 808 ntBASIC14.03□□□□□ -0.16
Trav14n-3A0A075B645 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.03□□□□□ -0.16
Trav14n-3A0A075B645 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav14n-3A0A075B645 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav14n-3A0A075B645 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav14n-3A0A075B645 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav14n-3A0A075B645 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav14n-3A0A075B645 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav14n-3A0A075B645 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav14n-3A0A075B645 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav14n-3A0A075B645 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav14n-3A0A075B645 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav14n-3A0A075B645 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav14n-3A0A075B645 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav14n-3A0A075B645 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav14n-3A0A075B645 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav14n-3A0A075B645 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav14n-3A0A075B645 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav14n-3A0A075B645 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.02□□□□□ -0.16
Trav14n-3A0A075B645 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav14n-3A0A075B645 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav14n-3A0A075B645 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav14n-3A0A075B645 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav14n-3A0A075B645 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav14n-3A0A075B645 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
Trav14n-3A0A075B645 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav14n-3A0A075B645 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav14n-3A0A075B645 Gm13238-201ENSMUST00000117655 780 ntBASIC14.02□□□□□ -0.17
Trav14n-3A0A075B645 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Trav14n-3A0A075B645 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav14n-3A0A075B645 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav14n-3A0A075B645 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav14n-3A0A075B645 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav14n-3A0A075B645 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav14n-3A0A075B645 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav14n-3A0A075B645 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav14n-3A0A075B645 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Trav14n-3A0A075B645 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav14n-3A0A075B645 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Gm6598-201ENSMUST00000202719 2615 ntBASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Fcho2-208ENSMUST00000224992 2964 ntBASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav14n-3A0A075B645 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav14n-3A0A075B645 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.98□□□□□ -0.17
Trav14n-3A0A075B645 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav14n-3A0A075B645 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav14n-3A0A075B645 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms