Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav13-1A0A075B644 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
Trav13-1A0A075B644 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav13-1A0A075B644 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav13-1A0A075B644 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Gm6365-201ENSMUST00000054711 744 ntBASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav13-1A0A075B644 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-1A0A075B644 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav13-1A0A075B644 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-1A0A075B644 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-1A0A075B644 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-1A0A075B644 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-1A0A075B644 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-1A0A075B644 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav13-1A0A075B644 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-1A0A075B644 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav13-1A0A075B644 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-1A0A075B644 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-1A0A075B644 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-1A0A075B644 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13-1A0A075B644 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Golph3-205ENSMUST00000228671 2842 ntBASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Gm7290-201ENSMUST00000104990 617 ntBASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Gm12918-201ENSMUST00000120234 636 ntBASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Gm15710-201ENSMUST00000121821 636 ntBASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Gm5075-201ENSMUST00000196916 622 ntBASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Gm5408-201ENSMUST00000197998 747 ntBASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav13-1A0A075B644 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13-1A0A075B644 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms