Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Gm12366-201ENSMUST00000121722 873 ntBASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Gm5786-201ENSMUST00000085368 882 ntBASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.06□□□□□ -0.16
Trav7n-4A0A075B620 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Mir6538-201ENSMUST00000183713 110 ntBASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.05□□□□□ -0.16
Trav7n-4A0A075B620 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.04□□□□□ -0.16
Trav7n-4A0A075B620 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Gm11175-201ENSMUST00000116172 543 ntBASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Gm9870-201ENSMUST00000063874 645 ntBASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-4A0A075B620 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-4A0A075B620 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-4A0A075B620 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-4A0A075B620 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-4A0A075B620 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-4A0A075B620 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
Trav7n-4A0A075B620 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-4A0A075B620 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-4A0A075B620 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav7n-4A0A075B620 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-4A0A075B620 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-4A0A075B620 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-4A0A075B620 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Trav7n-4A0A075B620 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-4A0A075B620 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-4A0A075B620 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms