Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC8.17□□□□□ -1.1
NcanP55066 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 4930470B04Rik-201ENSMUST00000192005 1926 ntBASIC8.17□□□□□ -1.1
NcanP55066 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
NcanP55066 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Ak7-201ENSMUST00000040876 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 AC123832.1-201ENSMUST00000214120 2371 ntBASIC8.17□□□□□ -1.1
NcanP55066 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC8.17□□□□□ -1.1
NcanP55066 Gm12518-201ENSMUST00000122075 779 ntBASIC8.17□□□□□ -1.1
NcanP55066 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC8.17□□□□□ -1.1
NcanP55066 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Gm22917-201ENSMUST00000180116 110 ntBASIC8.17□□□□□ -1.1
NcanP55066 Gm27653-201ENSMUST00000185037 136 ntBASIC8.17□□□□□ -1.1
NcanP55066 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Gm29008-201ENSMUST00000189387 298 ntBASIC8.17□□□□□ -1.1
NcanP55066 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC8.17□□□□□ -1.1
NcanP55066 Gm37620-201ENSMUST00000192910 501 ntBASIC8.17□□□□□ -1.1
NcanP55066 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
NcanP55066 Gm43012-201ENSMUST00000198569 937 ntBASIC8.17□□□□□ -1.1
NcanP55066 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC8.17□□□□□ -1.1
NcanP55066 AC155270.1-202ENSMUST00000221503 352 ntBASIC8.17□□□□□ -1.1
NcanP55066 AC131187.2-201ENSMUST00000223936 994 ntBASIC8.17□□□□□ -1.1
NcanP55066 Gm5514-201ENSMUST00000060477 306 ntBASIC8.17□□□□□ -1.1
NcanP55066 Sox5-205ENSMUST00000111749 3879 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Klhl20-201ENSMUST00000111611 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Gm11868-201ENSMUST00000121594 1478 ntBASIC8.17□□□□□ -1.1
NcanP55066 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Zfp286-201ENSMUST00000054654 3051 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Npy2r-204ENSMUST00000182831 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Aasdh-201ENSMUST00000069709 3381 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
NcanP55066 Paqr8-204ENSMUST00000189400 5330 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
NcanP55066 Gm11548-201ENSMUST00000140203 2199 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NcanP55066 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
NcanP55066 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Plcd4-202ENSMUST00000067916 4552 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
NcanP55066 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
NcanP55066 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
NcanP55066 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC8.16□□□□□ -1.1
NcanP55066 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Gm17170-201ENSMUST00000112785 316 ntBASIC8.16□□□□□ -1.1
NcanP55066 Gm11821-201ENSMUST00000117335 979 ntBASIC8.16□□□□□ -1.1
NcanP55066 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC8.16□□□□□ -1.1
NcanP55066 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC8.16□□□□□ -1.1
NcanP55066 Gm16072-201ENSMUST00000119574 2377 ntBASIC8.16□□□□□ -1.1
NcanP55066 Gm12970-201ENSMUST00000134911 581 ntTSL 3 BASIC8.16□□□□□ -1.1
NcanP55066 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC8.16□□□□□ -1.1
NcanP55066 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Prr13-202ENSMUST00000164688 1020 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
NcanP55066 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC8.16□□□□□ -1.1
NcanP55066 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC8.16□□□□□ -1.1
NcanP55066 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC8.16□□□□□ -1.1
NcanP55066 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC8.16□□□□□ -1.1
NcanP55066 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC8.16□□□□□ -1.1
NcanP55066 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC8.16□□□□□ -1.1
NcanP55066 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC8.16□□□□□ -1.1
NcanP55066 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC8.16□□□□□ -1.1
NcanP55066 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Gm27039-201ENSMUST00000182438 962 ntBASIC8.16□□□□□ -1.1
NcanP55066 Rps12l1-201ENSMUST00000183090 399 ntBASIC8.16□□□□□ -1.1
NcanP55066 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC8.16□□□□□ -1.1
NcanP55066 Gm28720-201ENSMUST00000190728 3156 ntBASIC8.16□□□□□ -1.1
NcanP55066 Gm43595-201ENSMUST00000196464 1071 ntBASIC8.16□□□□□ -1.1
NcanP55066 Ociad1-204ENSMUST00000200935 1139 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC8.16□□□□□ -1.1
NcanP55066 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC8.16□□□□□ -1.1
NcanP55066 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC8.16□□□□□ -1.1
NcanP55066 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC8.16□□□□□ -1.1
NcanP55066 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.16□□□□□ -1.1
NcanP55066 CT009550.2-201ENSMUST00000228851 399 ntBASIC8.16□□□□□ -1.1
NcanP55066 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
NcanP55066 Gm22504-201ENSMUST00000082963 139 ntBASIC8.16□□□□□ -1.1
NcanP55066 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
NcanP55066 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
NcanP55066 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Dhx30-204ENSMUST00000196171 3885 ntTSL 5 BASIC8.16□□□□□ -1.1
NcanP55066 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NcanP55066 Utp14a-201ENSMUST00000080713 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NcanP55066 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NcanP55066 Tbc1d24-214ENSMUST00000201960 4305 ntTSL 5 BASIC8.15□□□□□ -1.1
NcanP55066 Gm11690-201ENSMUST00000128183 1856 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms