Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC8.94□□□□□ -0.98
Col1a1P11087 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC8.94□□□□□ -0.98
Col1a1P11087 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Col1a1P11087 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.94□□□□□ -0.98
Col1a1P11087 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Col1a1P11087 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Col1a1P11087 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col1a1P11087 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Col1a1P11087 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.93□□□□□ -0.98
Col1a1P11087 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC8.93□□□□□ -0.98
Col1a1P11087 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Col1a1P11087 Arhgap17-211ENSMUST00000207010 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 AC158686.1-201ENSMUST00000218068 2332 ntBASIC8.93□□□□□ -0.98
Col1a1P11087 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Col1a1P11087 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC8.93□□□□□ -0.98
Col1a1P11087 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Col1a1P11087 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC8.93□□□□□ -0.98
Col1a1P11087 Gm16113-201ENSMUST00000159629 372 ntBASIC8.93□□□□□ -0.98
Col1a1P11087 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 Gm42782-201ENSMUST00000197286 522 ntBASIC8.93□□□□□ -0.98
Col1a1P11087 Gm43560-201ENSMUST00000198100 773 ntBASIC8.93□□□□□ -0.98
Col1a1P11087 Gm43926-201ENSMUST00000203978 430 ntBASIC8.93□□□□□ -0.98
Col1a1P11087 Gm17834-201ENSMUST00000204322 891 ntBASIC8.93□□□□□ -0.98
Col1a1P11087 CT025630.2-201ENSMUST00000228293 487 ntBASIC8.93□□□□□ -0.98
Col1a1P11087 Gm5446-201ENSMUST00000091762 784 ntBASIC8.93□□□□□ -0.98
Col1a1P11087 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 BC085271-201ENSMUST00000191852 1487 ntBASIC8.93□□□□□ -0.98
Col1a1P11087 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC8.93□□□□□ -0.98
Col1a1P11087 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC8.93□□□□□ -0.98
Col1a1P11087 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 Gm16478-201ENSMUST00000208113 5084 ntBASIC8.93□□□□□ -0.98
Col1a1P11087 Chordc1-201ENSMUST00000001825 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 AC122346.2-201ENSMUST00000224326 2931 ntBASIC8.93□□□□□ -0.98
Col1a1P11087 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
Col1a1P11087 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col1a1P11087 Gm10568-201ENSMUST00000193244 1634 ntBASIC8.93□□□□□ -0.98
Col1a1P11087 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Col1a1P11087 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Col1a1P11087 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Col1a1P11087 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
Col1a1P11087 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Col1a1P11087 Gm38273-201ENSMUST00000194987 2382 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Gm44289-201ENSMUST00000204144 1390 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Gm25379-201ENSMUST00000104338 114 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Gm12653-201ENSMUST00000117778 561 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Gm13900-201ENSMUST00000119402 498 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Gm4773-201ENSMUST00000120392 702 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8.92□□□□□ -0.98
Col1a1P11087 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Gm20396-201ENSMUST00000173358 745 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Gm38226-201ENSMUST00000192207 521 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Gm42734-201ENSMUST00000201656 878 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Gm19217-201ENSMUST00000218238 328 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.92□□□□□ -0.98
Col1a1P11087 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Col1a1P11087 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Col1a1P11087 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Col1a1P11087 Zfp408-202ENSMUST00000111333 3740 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Ptges-202ENSMUST00000102852 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC8.92□□□□□ -0.98
Col1a1P11087 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.92□□□□□ -0.98
Col1a1P11087 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col1a1P11087 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.92□□□□□ -0.98
Col1a1P11087 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 444.5 ms