Protein–RNA interactions for Protein: Q9Z321

Top3b, DNA topoisomerase 3-beta-1, mousemouse

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top3bQ9Z321 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Top3bQ9Z321 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Top3bQ9Z321 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Top3bQ9Z321 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.49■□□□□ 0.71
Top3bQ9Z321 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.49■□□□□ 0.71
Top3bQ9Z321 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Top3bQ9Z321 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Top3bQ9Z321 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Top3bQ9Z321 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Top3bQ9Z321 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Top3bQ9Z321 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.48■□□□□ 0.71
Top3bQ9Z321 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Top3bQ9Z321 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.48■□□□□ 0.71
Top3bQ9Z321 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Top3bQ9Z321 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Top3bQ9Z321 Gm26524-201ENSMUST00000192339 390 ntBASIC19.48■□□□□ 0.71
Top3bQ9Z321 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.48■□□□□ 0.71
Top3bQ9Z321 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Top3bQ9Z321 Golph3-205ENSMUST00000228671 2842 ntBASIC19.48■□□□□ 0.71
Top3bQ9Z321 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Top3bQ9Z321 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Top3bQ9Z321 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Top3bQ9Z321 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Top3bQ9Z321 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Top3bQ9Z321 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Top3bQ9Z321 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Top3bQ9Z321 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.47■□□□□ 0.71
Top3bQ9Z321 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Top3bQ9Z321 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.47■□□□□ 0.71
Top3bQ9Z321 Gm12896-201ENSMUST00000118430 226 ntBASIC19.47■□□□□ 0.71
Top3bQ9Z321 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Top3bQ9Z321 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.47■□□□□ 0.71
Top3bQ9Z321 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Top3bQ9Z321 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Top3bQ9Z321 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Top3bQ9Z321 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Top3bQ9Z321 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.46■□□□□ 0.71
Top3bQ9Z321 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Top3bQ9Z321 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.46■□□□□ 0.71
Top3bQ9Z321 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Top3bQ9Z321 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Top3bQ9Z321 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Top3bQ9Z321 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Top3bQ9Z321 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.45■□□□□ 0.7
Top3bQ9Z321 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Top3bQ9Z321 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Top3bQ9Z321 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Top3bQ9Z321 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Top3bQ9Z321 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Top3bQ9Z321 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Top3bQ9Z321 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Top3bQ9Z321 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.45■□□□□ 0.7
Top3bQ9Z321 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Top3bQ9Z321 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.45■□□□□ 0.7
Top3bQ9Z321 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Top3bQ9Z321 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Top3bQ9Z321 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top3bQ9Z321 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Top3bQ9Z321 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top3bQ9Z321 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top3bQ9Z321 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.44■□□□□ 0.7
Top3bQ9Z321 Gm37055-201ENSMUST00000191866 133 ntBASIC19.44■□□□□ 0.7
Top3bQ9Z321 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.44■□□□□ 0.7
Top3bQ9Z321 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.44■□□□□ 0.7
Top3bQ9Z321 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top3bQ9Z321 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top3bQ9Z321 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top3bQ9Z321 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Top3bQ9Z321 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.44■□□□□ 0.7
Top3bQ9Z321 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Top3bQ9Z321 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top3bQ9Z321 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Top3bQ9Z321 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Top3bQ9Z321 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Top3bQ9Z321 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Top3bQ9Z321 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Top3bQ9Z321 Mir6236-201ENSMUST00000184437 123 ntBASIC19.43■□□□□ 0.7
Top3bQ9Z321 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.43■□□□□ 0.7
Top3bQ9Z321 Rab3c-203ENSMUST00000224180 967 ntBASIC19.43■□□□□ 0.7
Top3bQ9Z321 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Top3bQ9Z321 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Top3bQ9Z321 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.43■□□□□ 0.7
Top3bQ9Z321 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Top3bQ9Z321 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Top3bQ9Z321 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Top3bQ9Z321 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Top3bQ9Z321 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.42■□□□□ 0.7
Top3bQ9Z321 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Top3bQ9Z321 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.42■□□□□ 0.7
Top3bQ9Z321 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Top3bQ9Z321 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Top3bQ9Z321 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Top3bQ9Z321 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top3bQ9Z321 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Top3bQ9Z321 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top3bQ9Z321 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top3bQ9Z321 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top3bQ9Z321 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.41■□□□□ 0.7
Top3bQ9Z321 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Top3bQ9Z321 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms