Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Crlf3Q9Z2L7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Crlf3Q9Z2L7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Crlf3Q9Z2L7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Crlf3Q9Z2L7 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.77■□□□□ 0.6
Crlf3Q9Z2L7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Crlf3Q9Z2L7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.77■□□□□ 0.6
Crlf3Q9Z2L7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Crlf3Q9Z2L7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Crlf3Q9Z2L7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Crlf3Q9Z2L7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.77■□□□□ 0.6
Crlf3Q9Z2L7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Crlf3Q9Z2L7 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.77■□□□□ 0.59
Crlf3Q9Z2L7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Crlf3Q9Z2L7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crlf3Q9Z2L7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crlf3Q9Z2L7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.76■□□□□ 0.59
Crlf3Q9Z2L7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crlf3Q9Z2L7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.76■□□□□ 0.59
Crlf3Q9Z2L7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crlf3Q9Z2L7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crlf3Q9Z2L7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.76■□□□□ 0.59
Crlf3Q9Z2L7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crlf3Q9Z2L7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crlf3Q9Z2L7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crlf3Q9Z2L7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crlf3Q9Z2L7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Crlf3Q9Z2L7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crlf3Q9Z2L7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf3Q9Z2L7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf3Q9Z2L7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf3Q9Z2L7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf3Q9Z2L7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf3Q9Z2L7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf3Q9Z2L7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.75■□□□□ 0.59
Crlf3Q9Z2L7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf3Q9Z2L7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf3Q9Z2L7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf3Q9Z2L7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf3Q9Z2L7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf3Q9Z2L7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf3Q9Z2L7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf3Q9Z2L7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Crlf3Q9Z2L7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Crlf3Q9Z2L7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Crlf3Q9Z2L7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Crlf3Q9Z2L7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Crlf3Q9Z2L7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Crlf3Q9Z2L7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Crlf3Q9Z2L7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Crlf3Q9Z2L7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crlf3Q9Z2L7 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.72■□□□□ 0.59
Crlf3Q9Z2L7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Crlf3Q9Z2L7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crlf3Q9Z2L7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crlf3Q9Z2L7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Crlf3Q9Z2L7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Crlf3Q9Z2L7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crlf3Q9Z2L7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Crlf3Q9Z2L7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Crlf3Q9Z2L7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Crlf3Q9Z2L7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.71■□□□□ 0.59
Crlf3Q9Z2L7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Crlf3Q9Z2L7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.71■□□□□ 0.59
Crlf3Q9Z2L7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Crlf3Q9Z2L7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Crlf3Q9Z2L7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Crlf3Q9Z2L7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Crlf3Q9Z2L7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Crlf3Q9Z2L7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Crlf3Q9Z2L7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crlf3Q9Z2L7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Crlf3Q9Z2L7 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.7■□□□□ 0.58
Crlf3Q9Z2L7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Crlf3Q9Z2L7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crlf3Q9Z2L7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Crlf3Q9Z2L7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Crlf3Q9Z2L7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms