Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.07■□□□□ 0.96
SCN8AQ9UQD0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN8AQ9UQD0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCN8AQ9UQD0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCN8AQ9UQD0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.07■□□□□ 0.96
SCN8AQ9UQD0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN8AQ9UQD0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.07■□□□□ 0.96
SCN8AQ9UQD0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN8AQ9UQD0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCN8AQ9UQD0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.07■□□□□ 0.96
SCN8AQ9UQD0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN8AQ9UQD0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.06■□□□□ 0.96
SCN8AQ9UQD0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.06■□□□□ 0.96
SCN8AQ9UQD0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCN8AQ9UQD0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCN8AQ9UQD0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN8AQ9UQD0 Z98882.1-201ENST00000622160 2253 ntBASIC21.06■□□□□ 0.96
SCN8AQ9UQD0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCN8AQ9UQD0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.06■□□□□ 0.96
SCN8AQ9UQD0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.06■□□□□ 0.96
SCN8AQ9UQD0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SCN8AQ9UQD0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SCN8AQ9UQD0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN8AQ9UQD0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN8AQ9UQD0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 KRT19P1-201ENST00000405746 1186 ntBASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 NTF6G-201ENST00000591094 616 ntBASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 LINC02228-203ENST00000641970 1355 ntBASIC21.04■□□□□ 0.96
SCN8AQ9UQD0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 AC137761.2-201ENST00000561729 223 ntBASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 AC145350.3-201ENST00000569033 163 ntBASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 AC053503.5-201ENST00000601508 636 ntBASIC21.03■□□□□ 0.96
SCN8AQ9UQD0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN8AQ9UQD0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN8AQ9UQD0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.02■□□□□ 0.96
SCN8AQ9UQD0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN8AQ9UQD0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.02■□□□□ 0.96
SCN8AQ9UQD0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN8AQ9UQD0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN8AQ9UQD0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SCN8AQ9UQD0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN8AQ9UQD0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SCN8AQ9UQD0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 AC061975.6-201ENST00000579045 1553 ntBASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms