Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rtn3Q9ES97 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtn3Q9ES97 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rtn3Q9ES97 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.76■□□□□ 0.75
Rtn3Q9ES97 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.76■□□□□ 0.75
Rtn3Q9ES97 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtn3Q9ES97 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.76■□□□□ 0.75
Rtn3Q9ES97 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtn3Q9ES97 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Rtn3Q9ES97 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtn3Q9ES97 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rtn3Q9ES97 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Gm37179-201ENSMUST00000194862 823 ntBASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rtn3Q9ES97 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn3Q9ES97 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Rtn3Q9ES97 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn3Q9ES97 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Rtn3Q9ES97 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.74■□□□□ 0.75
Rtn3Q9ES97 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn3Q9ES97 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn3Q9ES97 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn3Q9ES97 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn3Q9ES97 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
Rtn3Q9ES97 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn3Q9ES97 Reep4-203ENSMUST00000226563 1444 ntBASIC19.74■□□□□ 0.75
Rtn3Q9ES97 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn3Q9ES97 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn3Q9ES97 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn3Q9ES97 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.73■□□□□ 0.75
Rtn3Q9ES97 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn3Q9ES97 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.73■□□□□ 0.75
Rtn3Q9ES97 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.73■□□□□ 0.75
Rtn3Q9ES97 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn3Q9ES97 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.73■□□□□ 0.75
Rtn3Q9ES97 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn3Q9ES97 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Gm7860-201ENSMUST00000121190 879 ntBASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn3Q9ES97 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn3Q9ES97 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn3Q9ES97 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn3Q9ES97 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.7■□□□□ 0.74
Rtn3Q9ES97 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn3Q9ES97 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Rtn3Q9ES97 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.7■□□□□ 0.74
Rtn3Q9ES97 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn3Q9ES97 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn3Q9ES97 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn3Q9ES97 Gm29257-201ENSMUST00000186115 639 ntBASIC19.7■□□□□ 0.74
Rtn3Q9ES97 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.7■□□□□ 0.74
Rtn3Q9ES97 Gm38205-201ENSMUST00000192243 258 ntBASIC19.7■□□□□ 0.74
Rtn3Q9ES97 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn3Q9ES97 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn3Q9ES97 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms