Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.26■□□□□ 0.51
5530400C23RikQ9D3I0 Gm8495-201ENSMUST00000188740 694 ntBASIC18.26■□□□□ 0.51
5530400C23RikQ9D3I0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
5530400C23RikQ9D3I0 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.26■□□□□ 0.51
5530400C23RikQ9D3I0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
5530400C23RikQ9D3I0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
5530400C23RikQ9D3I0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
5530400C23RikQ9D3I0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
5530400C23RikQ9D3I0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
5530400C23RikQ9D3I0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
5530400C23RikQ9D3I0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
5530400C23RikQ9D3I0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
5530400C23RikQ9D3I0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
5530400C23RikQ9D3I0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
5530400C23RikQ9D3I0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
5530400C23RikQ9D3I0 Gm13534-201ENSMUST00000121169 513 ntBASIC18.25■□□□□ 0.51
5530400C23RikQ9D3I0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
5530400C23RikQ9D3I0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
5530400C23RikQ9D3I0 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.25■□□□□ 0.51
5530400C23RikQ9D3I0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
5530400C23RikQ9D3I0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
5530400C23RikQ9D3I0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
5530400C23RikQ9D3I0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 AV356131-201ENSMUST00000206201 750 ntBASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
5530400C23RikQ9D3I0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Gm26571-201ENSMUST00000181399 666 ntBASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Gm7514-201ENSMUST00000209475 934 ntBASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
5530400C23RikQ9D3I0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
5530400C23RikQ9D3I0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms