Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RPAP1Q9BWH6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.77■■□□□ 1.72
RPAP1Q9BWH6 AC104187.1-201ENST00000607510 612 ntBASIC25.77■■□□□ 1.72
RPAP1Q9BWH6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RPAP1Q9BWH6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
RPAP1Q9BWH6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RPAP1Q9BWH6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.76■■□□□ 1.71
RPAP1Q9BWH6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.76■■□□□ 1.71
RPAP1Q9BWH6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RPAP1Q9BWH6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
RPAP1Q9BWH6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RPAP1Q9BWH6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RPAP1Q9BWH6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
RPAP1Q9BWH6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.75■■□□□ 1.71
RPAP1Q9BWH6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RPAP1Q9BWH6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
RPAP1Q9BWH6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.75■■□□□ 1.71
RPAP1Q9BWH6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.75■■□□□ 1.71
RPAP1Q9BWH6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.75■■□□□ 1.71
RPAP1Q9BWH6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.75■■□□□ 1.71
RPAP1Q9BWH6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RPAP1Q9BWH6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RPAP1Q9BWH6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC25.74■■□□□ 1.71
RPAP1Q9BWH6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC25.74■■□□□ 1.71
RPAP1Q9BWH6 AL050303.2-201ENST00000619798 666 ntBASIC25.74■■□□□ 1.71
RPAP1Q9BWH6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.74■■□□□ 1.71
RPAP1Q9BWH6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RPAP1Q9BWH6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.74■■□□□ 1.71
RPAP1Q9BWH6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RPAP1Q9BWH6 AC010542.4-201ENST00000563151 1910 ntBASIC25.73■■□□□ 1.71
RPAP1Q9BWH6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
RPAP1Q9BWH6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
RPAP1Q9BWH6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC25.73■■□□□ 1.71
RPAP1Q9BWH6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RPAP1Q9BWH6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RPAP1Q9BWH6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
RPAP1Q9BWH6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RPAP1Q9BWH6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RPAP1Q9BWH6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 FAM99A-202ENST00000538190 1989 ntBASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 ABHD17AP1-201ENST00000358206 933 ntBASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 GPX1P1-201ENST00000388829 606 ntBASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 AC142086.2-201ENST00000569753 217 ntBASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RPAP1Q9BWH6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RPAP1Q9BWH6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC25.71■■□□□ 1.71
RPAP1Q9BWH6 UBE2DNL-204ENST00000602536 740 ntBASIC25.71■■□□□ 1.71
RPAP1Q9BWH6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RPAP1Q9BWH6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RPAP1Q9BWH6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
RPAP1Q9BWH6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.71■■□□□ 1.71
RPAP1Q9BWH6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RPAP1Q9BWH6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RPAP1Q9BWH6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RPAP1Q9BWH6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RPAP1Q9BWH6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.7■■□□□ 1.71
RPAP1Q9BWH6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RPAP1Q9BWH6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25.7■■□□□ 1.71
RPAP1Q9BWH6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.7■■□□□ 1.71
RPAP1Q9BWH6 AC231657.2-201ENST00000624556 255 ntBASIC25.7■■□□□ 1.71
RPAP1Q9BWH6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.7■■□□□ 1.7
RPAP1Q9BWH6 AP004607.7-201ENST00000527152 1677 ntBASIC25.7■■□□□ 1.7
RPAP1Q9BWH6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.7
RPAP1Q9BWH6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
RPAP1Q9BWH6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC25.7■■□□□ 1.7
RPAP1Q9BWH6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 DUX4L16-201ENST00000555130 1264 ntBASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 AC055733.4-201ENST00000638462 1354 ntBASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC25.69■■□□□ 1.7
RPAP1Q9BWH6 MYCNOS-205ENST00000641950 531 ntBASIC25.69■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms