Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
ABCA3Q99758 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA3Q99758 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA3Q99758 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA3Q99758 RPPH1-201ENST00000516869 333 ntBASIC28.6■■■□□ 2.17
ABCA3Q99758 MAX-217ENST00000557277 728 ntTSL 3 BASIC28.6■■■□□ 2.17
ABCA3Q99758 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
ABCA3Q99758 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA3Q99758 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC28.6■■■□□ 2.17
ABCA3Q99758 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC28.6■■■□□ 2.17
ABCA3Q99758 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA3Q99758 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA3Q99758 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC28.6■■■□□ 2.17
ABCA3Q99758 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
ABCA3Q99758 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC28.6■■■□□ 2.17
ABCA3Q99758 SNORA78-201ENST00000459373 127 ntBASIC28.6■■■□□ 2.17
ABCA3Q99758 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA3Q99758 PBX1-209ENST00000485769 834 ntTSL 2 BASIC28.6■■■□□ 2.17
ABCA3Q99758 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC28.6■■■□□ 2.17
ABCA3Q99758 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC28.6■■■□□ 2.17
ABCA3Q99758 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC28.59■■■□□ 2.17
ABCA3Q99758 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA3Q99758 MIR718-201ENST00000390190 70 ntBASIC28.59■■■□□ 2.17
ABCA3Q99758 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
ABCA3Q99758 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA3Q99758 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA3Q99758 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA3Q99758 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC28.59■■■□□ 2.17
ABCA3Q99758 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC28.58■■■□□ 2.17
ABCA3Q99758 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC28.58■■■□□ 2.17
ABCA3Q99758 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
ABCA3Q99758 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC28.58■■■□□ 2.17
ABCA3Q99758 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC28.58■■■□□ 2.17
ABCA3Q99758 AC010331.1-201ENST00000611423 582 ntBASIC28.58■■■□□ 2.17
ABCA3Q99758 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA3Q99758 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC28.58■■■□□ 2.17
ABCA3Q99758 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA3Q99758 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA3Q99758 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC28.57■■■□□ 2.16
ABCA3Q99758 NME6-213ENST00000451657 871 ntTSL 2 BASIC28.57■■■□□ 2.16
ABCA3Q99758 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC28.57■■■□□ 2.16
ABCA3Q99758 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA3Q99758 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC28.57■■■□□ 2.16
ABCA3Q99758 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
ABCA3Q99758 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC28.57■■■□□ 2.16
ABCA3Q99758 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA3Q99758 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA3Q99758 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC28.57■■■□□ 2.16
ABCA3Q99758 CYP2T3P-201ENST00000601990 817 ntBASIC28.57■■■□□ 2.16
ABCA3Q99758 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.57■■■□□ 2.16
ABCA3Q99758 AC061975.6-201ENST00000579045 1553 ntBASIC28.56■■■□□ 2.16
ABCA3Q99758 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
ABCA3Q99758 ANOS2P-203ENST00000472227 1816 ntBASIC28.56■■■□□ 2.16
ABCA3Q99758 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCA3Q99758 AC012618.2-201ENST00000428058 849 ntBASIC28.56■■■□□ 2.16
ABCA3Q99758 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC28.56■■■□□ 2.16
ABCA3Q99758 LINC01023-201ENST00000606054 436 ntBASIC28.56■■■□□ 2.16
ABCA3Q99758 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC28.56■■■□□ 2.16
ABCA3Q99758 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC28.56■■■□□ 2.16
ABCA3Q99758 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC28.55■■■□□ 2.16
ABCA3Q99758 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC28.55■■■□□ 2.16
ABCA3Q99758 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
ABCA3Q99758 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ABCA3Q99758 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ABCA3Q99758 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.55■■■□□ 2.16
ABCA3Q99758 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ABCA3Q99758 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC28.55■■■□□ 2.16
ABCA3Q99758 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC28.54■■■□□ 2.16
ABCA3Q99758 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ABCA3Q99758 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC28.54■■■□□ 2.16
ABCA3Q99758 LSM12P1-201ENST00000411836 588 ntBASIC28.54■■■□□ 2.16
ABCA3Q99758 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
ABCA3Q99758 HLA-B-256ENST00000639848 1089 ntBASIC28.54■■■□□ 2.16
ABCA3Q99758 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
ABCA3Q99758 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ABCA3Q99758 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
ABCA3Q99758 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ABCA3Q99758 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
ABCA3Q99758 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC28.53■■■□□ 2.16
ABCA3Q99758 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC28.53■■■□□ 2.16
ABCA3Q99758 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ABCA3Q99758 MIR1224-201ENST00000408193 85 ntBASIC28.53■■■□□ 2.16
ABCA3Q99758 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
ABCA3Q99758 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
ABCA3Q99758 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
ABCA3Q99758 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.53■■■□□ 2.16
ABCA3Q99758 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ABCA3Q99758 THRA-202ENST00000394121 2260 ntTSL 2 BASIC28.52■■■□□ 2.16
ABCA3Q99758 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ABCA3Q99758 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ABCA3Q99758 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
ABCA3Q99758 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ABCA3Q99758 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ABCA3Q99758 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
ABCA3Q99758 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
ABCA3Q99758 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
ABCA3Q99758 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ABCA3Q99758 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC28.52■■■□□ 2.16
ABCA3Q99758 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC28.52■■■□□ 2.16
ABCA3Q99758 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC28.52■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms