Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rtn1Q8K0T0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.49■■□□□ 1.03
Rtn1Q8K0T0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Rtn1Q8K0T0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn1Q8K0T0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn1Q8K0T0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn1Q8K0T0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn1Q8K0T0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn1Q8K0T0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn1Q8K0T0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Rtn1Q8K0T0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn1Q8K0T0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn1Q8K0T0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn1Q8K0T0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn1Q8K0T0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn1Q8K0T0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn1Q8K0T0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Rtn1Q8K0T0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn1Q8K0T0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn1Q8K0T0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn1Q8K0T0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Rtn1Q8K0T0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn1Q8K0T0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn1Q8K0T0 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.47■■□□□ 1.03
Rtn1Q8K0T0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn1Q8K0T0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn1Q8K0T0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn1Q8K0T0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn1Q8K0T0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn1Q8K0T0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn1Q8K0T0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.45■■□□□ 1.02
Rtn1Q8K0T0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn1Q8K0T0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn1Q8K0T0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn1Q8K0T0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn1Q8K0T0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn1Q8K0T0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn1Q8K0T0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
Rtn1Q8K0T0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn1Q8K0T0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.44■■□□□ 1.02
Rtn1Q8K0T0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rtn1Q8K0T0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rtn1Q8K0T0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.44■■□□□ 1.02
Rtn1Q8K0T0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
Rtn1Q8K0T0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.44■■□□□ 1.02
Rtn1Q8K0T0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rtn1Q8K0T0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rtn1Q8K0T0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rtn1Q8K0T0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Rtn1Q8K0T0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rtn1Q8K0T0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rtn1Q8K0T0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Rtn1Q8K0T0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn1Q8K0T0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn1Q8K0T0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn1Q8K0T0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn1Q8K0T0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn1Q8K0T0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn1Q8K0T0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn1Q8K0T0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.43■■□□□ 1.02
Rtn1Q8K0T0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn1Q8K0T0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn1Q8K0T0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn1Q8K0T0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn1Q8K0T0 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.43■■□□□ 1.02
Rtn1Q8K0T0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn1Q8K0T0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rtn1Q8K0T0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.42■■□□□ 1.02
Rtn1Q8K0T0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.42■■□□□ 1.02
Rtn1Q8K0T0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rtn1Q8K0T0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.42■■□□□ 1.02
Rtn1Q8K0T0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.42■■□□□ 1.02
Rtn1Q8K0T0 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.42■■□□□ 1.02
Rtn1Q8K0T0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.42■■□□□ 1.02
Rtn1Q8K0T0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rtn1Q8K0T0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rtn1Q8K0T0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn1Q8K0T0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn1Q8K0T0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
Rtn1Q8K0T0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.41■■□□□ 1.02
Rtn1Q8K0T0 Gm37179-201ENSMUST00000194862 823 ntBASIC21.41■■□□□ 1.02
Rtn1Q8K0T0 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.41■■□□□ 1.02
Rtn1Q8K0T0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms