Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tsen54Q8C2A2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tsen54Q8C2A2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tsen54Q8C2A2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tsen54Q8C2A2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tsen54Q8C2A2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tsen54Q8C2A2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tsen54Q8C2A2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.54■□□□□ 0.08
Tsen54Q8C2A2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tsen54Q8C2A2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tsen54Q8C2A2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tsen54Q8C2A2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tsen54Q8C2A2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tsen54Q8C2A2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tsen54Q8C2A2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tsen54Q8C2A2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Tsen54Q8C2A2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tsen54Q8C2A2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Tsen54Q8C2A2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tsen54Q8C2A2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.52■□□□□ 0.07
Tsen54Q8C2A2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tsen54Q8C2A2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tsen54Q8C2A2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Tsen54Q8C2A2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tsen54Q8C2A2 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.52■□□□□ 0.07
Tsen54Q8C2A2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tsen54Q8C2A2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tsen54Q8C2A2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms