Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Prpf18Q8BM39 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.68■□□□□ 0.42
Prpf18Q8BM39 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf18Q8BM39 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf18Q8BM39 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Prpf18Q8BM39 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Prpf18Q8BM39 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.68■□□□□ 0.42
Prpf18Q8BM39 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf18Q8BM39 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf18Q8BM39 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.66■□□□□ 0.42
Prpf18Q8BM39 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.66■□□□□ 0.42
Prpf18Q8BM39 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.66■□□□□ 0.42
Prpf18Q8BM39 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf18Q8BM39 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf18Q8BM39 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf18Q8BM39 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Prpf18Q8BM39 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf18Q8BM39 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prpf18Q8BM39 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf18Q8BM39 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf18Q8BM39 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf18Q8BM39 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Prpf18Q8BM39 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf18Q8BM39 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf18Q8BM39 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Prpf18Q8BM39 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf18Q8BM39 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf18Q8BM39 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Prpf18Q8BM39 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Prpf18Q8BM39 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf18Q8BM39 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf18Q8BM39 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf18Q8BM39 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf18Q8BM39 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf18Q8BM39 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf18Q8BM39 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf18Q8BM39 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf18Q8BM39 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf18Q8BM39 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf18Q8BM39 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Prpf18Q8BM39 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Prpf18Q8BM39 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf18Q8BM39 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf18Q8BM39 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf18Q8BM39 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf18Q8BM39 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf18Q8BM39 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf18Q8BM39 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Prpf18Q8BM39 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.63■□□□□ 0.41
Prpf18Q8BM39 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Prpf18Q8BM39 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf18Q8BM39 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf18Q8BM39 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf18Q8BM39 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf18Q8BM39 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf18Q8BM39 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf18Q8BM39 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf18Q8BM39 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf18Q8BM39 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf18Q8BM39 Gm13241-201ENSMUST00000094493 780 ntBASIC17.62■□□□□ 0.41
Prpf18Q8BM39 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf18Q8BM39 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.62■□□□□ 0.41
Prpf18Q8BM39 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf18Q8BM39 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf18Q8BM39 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf18Q8BM39 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.61■□□□□ 0.41
Prpf18Q8BM39 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf18Q8BM39 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf18Q8BM39 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf18Q8BM39 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf18Q8BM39 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf18Q8BM39 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.61■□□□□ 0.41
Prpf18Q8BM39 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.61■□□□□ 0.41
Prpf18Q8BM39 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf18Q8BM39 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf18Q8BM39 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Prpf18Q8BM39 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf18Q8BM39 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.61■□□□□ 0.41
Prpf18Q8BM39 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf18Q8BM39 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Prpf18Q8BM39 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf18Q8BM39 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms