Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc3Q64519 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sdc3Q64519 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.8■□□□□ 0.44
Sdc3Q64519 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc3Q64519 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc3Q64519 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc3Q64519 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sdc3Q64519 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc3Q64519 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Sdc3Q64519 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc3Q64519 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc3Q64519 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.79■□□□□ 0.44
Sdc3Q64519 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc3Q64519 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Sdc3Q64519 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.79■□□□□ 0.44
Sdc3Q64519 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Sdc3Q64519 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc3Q64519 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.79■□□□□ 0.44
Sdc3Q64519 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.79■□□□□ 0.44
Sdc3Q64519 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc3Q64519 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc3Q64519 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc3Q64519 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc3Q64519 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.79■□□□□ 0.44
Sdc3Q64519 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc3Q64519 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc3Q64519 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc3Q64519 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sdc3Q64519 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc3Q64519 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc3Q64519 Gm5408-201ENSMUST00000197998 747 ntBASIC17.78■□□□□ 0.44
Sdc3Q64519 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc3Q64519 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc3Q64519 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc3Q64519 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sdc3Q64519 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc3Q64519 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc3Q64519 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.78■□□□□ 0.44
Sdc3Q64519 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc3Q64519 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc3Q64519 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Sdc3Q64519 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdc3Q64519 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdc3Q64519 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.77■□□□□ 0.44
Sdc3Q64519 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.77■□□□□ 0.44
Sdc3Q64519 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Sdc3Q64519 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdc3Q64519 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdc3Q64519 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sdc3Q64519 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sdc3Q64519 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sdc3Q64519 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc3Q64519 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sdc3Q64519 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc3Q64519 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc3Q64519 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc3Q64519 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.76■□□□□ 0.43
Sdc3Q64519 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc3Q64519 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc3Q64519 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sdc3Q64519 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Sdc3Q64519 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc3Q64519 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.76■□□□□ 0.43
Sdc3Q64519 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc3Q64519 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc3Q64519 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc3Q64519 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc3Q64519 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.76■□□□□ 0.43
Sdc3Q64519 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc3Q64519 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sdc3Q64519 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc3Q64519 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc3Q64519 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc3Q64519 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc3Q64519 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc3Q64519 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sdc3Q64519 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
Sdc3Q64519 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Sdc3Q64519 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdc3Q64519 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.75■□□□□ 0.43
Sdc3Q64519 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sdc3Q64519 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.74■□□□□ 0.43
Sdc3Q64519 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc3Q64519 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc3Q64519 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc3Q64519 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc3Q64519 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sdc3Q64519 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.74■□□□□ 0.43
Sdc3Q64519 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.74■□□□□ 0.43
Sdc3Q64519 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.74■□□□□ 0.43
Sdc3Q64519 Gm6211-202ENSMUST00000167849 925 ntBASIC17.74■□□□□ 0.43
Sdc3Q64519 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc3Q64519 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.74■□□□□ 0.43
Sdc3Q64519 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc3Q64519 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc3Q64519 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc3Q64519 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc3Q64519 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc3Q64519 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdc3Q64519 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 350.4 ms