Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN20Q4JDL3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN20Q4JDL3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN20Q4JDL3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTPN20Q4JDL3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTPN20Q4JDL3 AL137060.1-201ENST00000618151 2648 ntBASIC22.29■■□□□ 1.16
PTPN20Q4JDL3 KRT87P-202ENST00000534226 1464 ntBASIC22.29■■□□□ 1.16
PTPN20Q4JDL3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.29■■□□□ 1.16
PTPN20Q4JDL3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PTPN20Q4JDL3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.29■■□□□ 1.16
PTPN20Q4JDL3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.29■■□□□ 1.16
PTPN20Q4JDL3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PTPN20Q4JDL3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PTPN20Q4JDL3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTPN20Q4JDL3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTPN20Q4JDL3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PTPN20Q4JDL3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.28■■□□□ 1.16
PTPN20Q4JDL3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.28■■□□□ 1.16
PTPN20Q4JDL3 KRT18P14-201ENST00000534205 1250 ntBASIC22.28■■□□□ 1.16
PTPN20Q4JDL3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTPN20Q4JDL3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PTPN20Q4JDL3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.28■■□□□ 1.16
PTPN20Q4JDL3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTPN20Q4JDL3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTPN20Q4JDL3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTPN20Q4JDL3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.27■■□□□ 1.16
PTPN20Q4JDL3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.27■■□□□ 1.16
PTPN20Q4JDL3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PTPN20Q4JDL3 AC053503.5-201ENST00000601508 636 ntBASIC22.27■■□□□ 1.16
PTPN20Q4JDL3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.27■■□□□ 1.16
PTPN20Q4JDL3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
PTPN20Q4JDL3 FEM1AP4-201ENST00000443167 1987 ntBASIC22.27■■□□□ 1.15
PTPN20Q4JDL3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 AF106564.1-201ENST00000607058 2553 ntBASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 AL024507.2-201ENST00000606070 2574 ntBASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.26■■□□□ 1.15
PTPN20Q4JDL3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 AC097381.1-201ENST00000429019 1296 ntBASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 DUX4L2-201ENST00000561772 1275 ntBASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 DUX4L6-201ENST00000626483 1275 ntBASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 DUX4L1-201ENST00000627662 1275 ntBASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 DUX4L8-201ENST00000629013 1275 ntBASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 DUX4L3-201ENST00000630187 1275 ntBASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 DUX4L7-201ENST00000630678 1275 ntBASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 DUX4L5-201ENST00000630834 1275 ntBASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.25■■□□□ 1.15
PTPN20Q4JDL3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PTPN20Q4JDL3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTPN20Q4JDL3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.24■■□□□ 1.15
PTPN20Q4JDL3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
PTPN20Q4JDL3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTPN20Q4JDL3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.24■■□□□ 1.15
PTPN20Q4JDL3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.24■■□□□ 1.15
PTPN20Q4JDL3 KRT18P61-201ENST00000585825 1298 ntBASIC22.24■■□□□ 1.15
PTPN20Q4JDL3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms