Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp46P62069 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Usp46P62069 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp46P62069 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp46P62069 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.43■□□□□ 0.7
Usp46P62069 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp46P62069 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp46P62069 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp46P62069 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp46P62069 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.43■□□□□ 0.7
Usp46P62069 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp46P62069 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp46P62069 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp46P62069 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp46P62069 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp46P62069 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Usp46P62069 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp46P62069 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.42■□□□□ 0.7
Usp46P62069 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Usp46P62069 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.42■□□□□ 0.7
Usp46P62069 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Usp46P62069 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.42■□□□□ 0.7
Usp46P62069 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Usp46P62069 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp46P62069 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp46P62069 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp46P62069 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.42■□□□□ 0.7
Usp46P62069 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp46P62069 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp46P62069 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp46P62069 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp46P62069 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp46P62069 Gm20049-201ENSMUST00000219950 730 ntBASIC19.41■□□□□ 0.7
Usp46P62069 Rab3c-203ENSMUST00000224180 967 ntBASIC19.41■□□□□ 0.7
Usp46P62069 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp46P62069 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp46P62069 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp46P62069 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp46P62069 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp46P62069 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp46P62069 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp46P62069 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Usp46P62069 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.4■□□□□ 0.7
Usp46P62069 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp46P62069 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Usp46P62069 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Usp46P62069 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp46P62069 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.4■□□□□ 0.7
Usp46P62069 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp46P62069 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp46P62069 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Usp46P62069 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.39■□□□□ 0.69
Usp46P62069 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.39■□□□□ 0.69
Usp46P62069 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp46P62069 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Usp46P62069 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Usp46P62069 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp46P62069 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp46P62069 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Usp46P62069 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp46P62069 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp46P62069 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.39■□□□□ 0.69
Usp46P62069 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp46P62069 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Usp46P62069 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp46P62069 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp46P62069 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.38■□□□□ 0.69
Usp46P62069 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp46P62069 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Usp46P62069 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.38■□□□□ 0.69
Usp46P62069 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp46P62069 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.38■□□□□ 0.69
Usp46P62069 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp46P62069 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Usp46P62069 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Usp46P62069 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp46P62069 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp46P62069 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp46P62069 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp46P62069 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Usp46P62069 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp46P62069 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp46P62069 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp46P62069 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp46P62069 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp46P62069 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp46P62069 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Usp46P62069 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp46P62069 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp46P62069 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.37■□□□□ 0.69
Usp46P62069 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Usp46P62069 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp46P62069 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp46P62069 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Usp46P62069 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp46P62069 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp46P62069 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp46P62069 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Usp46P62069 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.36■□□□□ 0.69
Usp46P62069 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms