Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.02■□□□□ 0.48
Lbx1P52955 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lbx1P52955 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Lbx1P52955 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lbx1P52955 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.01■□□□□ 0.47
Lbx1P52955 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lbx1P52955 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lbx1P52955 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lbx1P52955 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.01■□□□□ 0.47
Lbx1P52955 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Lbx1P52955 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.01■□□□□ 0.47
Lbx1P52955 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.01■□□□□ 0.47
Lbx1P52955 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Lbx1P52955 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Lbx1P52955 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lbx1P52955 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lbx1P52955 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lbx1P52955 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lbx1P52955 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
Lbx1P52955 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lbx1P52955 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Lbx1P52955 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lbx1P52955 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18■□□□□ 0.47
Lbx1P52955 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lbx1P52955 Gm43073-201ENSMUST00000198200 1189 ntBASIC18■□□□□ 0.47
Lbx1P52955 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lbx1P52955 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Lbx1P52955 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18■□□□□ 0.47
Lbx1P52955 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Lbx1P52955 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lbx1P52955 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Lbx1P52955 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lbx1P52955 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lbx1P52955 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.99■□□□□ 0.47
Lbx1P52955 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.99■□□□□ 0.47
Lbx1P52955 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.99■□□□□ 0.47
Lbx1P52955 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Lbx1P52955 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lbx1P52955 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Lbx1P52955 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lbx1P52955 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lbx1P52955 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lbx1P52955 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lbx1P52955 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Lbx1P52955 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lbx1P52955 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Lbx1P52955 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lbx1P52955 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Lbx1P52955 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.98■□□□□ 0.47
Lbx1P52955 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.98■□□□□ 0.47
Lbx1P52955 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.98■□□□□ 0.47
Lbx1P52955 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.98■□□□□ 0.47
Lbx1P52955 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.98■□□□□ 0.47
Lbx1P52955 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lbx1P52955 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Lbx1P52955 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lbx1P52955 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Lbx1P52955 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lbx1P52955 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lbx1P52955 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Lbx1P52955 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Lbx1P52955 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Lbx1P52955 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.97■□□□□ 0.47
Lbx1P52955 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.97■□□□□ 0.47
Lbx1P52955 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Lbx1P52955 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lbx1P52955 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Lbx1P52955 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lbx1P52955 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lbx1P52955 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lbx1P52955 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lbx1P52955 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lbx1P52955 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Lbx1P52955 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lbx1P52955 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
Lbx1P52955 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Lbx1P52955 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lbx1P52955 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Lbx1P52955 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lbx1P52955 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lbx1P52955 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Lbx1P52955 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.95■□□□□ 0.46
Lbx1P52955 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.95■□□□□ 0.46
Lbx1P52955 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms