Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF140P52738 AC053503.5-201ENST00000601508 636 ntBASIC21.12■□□□□ 0.97
ZNF140P52738 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF140P52738 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF140P52738 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.12■□□□□ 0.97
ZNF140P52738 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF140P52738 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF140P52738 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF140P52738 AC019069.1-201ENST00000610008 1333 ntBASIC21.11■□□□□ 0.97
ZNF140P52738 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF140P52738 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF140P52738 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF140P52738 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ZNF140P52738 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF140P52738 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.11■□□□□ 0.97
ZNF140P52738 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.11■□□□□ 0.97
ZNF140P52738 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF140P52738 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF140P52738 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF140P52738 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF140P52738 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF140P52738 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.1■□□□□ 0.97
ZNF140P52738 KRT18P14-201ENST00000534205 1250 ntBASIC21.1■□□□□ 0.97
ZNF140P52738 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF140P52738 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.1■□□□□ 0.97
ZNF140P52738 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF140P52738 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF140P52738 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.1■□□□□ 0.97
ZNF140P52738 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF140P52738 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF140P52738 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF140P52738 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
ZNF140P52738 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF140P52738 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF140P52738 FEM1AP4-201ENST00000443167 1987 ntBASIC21.09■□□□□ 0.97
ZNF140P52738 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.09■□□□□ 0.97
ZNF140P52738 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.09■□□□□ 0.97
ZNF140P52738 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF140P52738 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.09■□□□□ 0.97
ZNF140P52738 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF140P52738 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF140P52738 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ZNF140P52738 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.08■□□□□ 0.97
ZNF140P52738 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.08■□□□□ 0.97
ZNF140P52738 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF140P52738 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
ZNF140P52738 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.08■□□□□ 0.97
ZNF140P52738 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF140P52738 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF140P52738 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.08■□□□□ 0.96
ZNF140P52738 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF140P52738 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.07■□□□□ 0.96
ZNF140P52738 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF140P52738 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF140P52738 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF140P52738 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF140P52738 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF140P52738 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF140P52738 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF140P52738 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.07■□□□□ 0.96
ZNF140P52738 AL024507.2-201ENST00000606070 2574 ntBASIC21.07■□□□□ 0.96
ZNF140P52738 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF140P52738 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF140P52738 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF140P52738 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF140P52738 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF140P52738 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF140P52738 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF140P52738 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.06■□□□□ 0.96
ZNF140P52738 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.06■□□□□ 0.96
ZNF140P52738 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF140P52738 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ZNF140P52738 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF140P52738 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF140P52738 AC097381.1-201ENST00000429019 1296 ntBASIC21.06■□□□□ 0.96
ZNF140P52738 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.06■□□□□ 0.96
ZNF140P52738 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.06■□□□□ 0.96
ZNF140P52738 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF140P52738 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.06■□□□□ 0.96
ZNF140P52738 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF140P52738 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ZNF140P52738 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNF140P52738 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.06■□□□□ 0.96
ZNF140P52738 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ZNF140P52738 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ZNF140P52738 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF140P52738 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF140P52738 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF140P52738 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF140P52738 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF140P52738 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF140P52738 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ZNF140P52738 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF140P52738 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF140P52738 DUX4L2-201ENST00000561772 1275 ntBASIC21.05■□□□□ 0.96
ZNF140P52738 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF140P52738 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
ZNF140P52738 MIR6821-201ENST00000617625 74 ntBASIC21.05■□□□□ 0.96
ZNF140P52738 DUX4L6-201ENST00000626483 1275 ntBASIC21.05■□□□□ 0.96
ZNF140P52738 DUX4L1-201ENST00000627662 1275 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms